RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 STN1Q9H668 368 aaKnown RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 TMEM8AQ9HCN3 771 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 JPH1Q9HDC5 661 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 C12orf4Q9NQ89 552 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 SLC9A2Q9UBY0 812 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 RGS17Q9UGC6 210 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-214ENST00000540109 ATP6V1HQ9UI12 483 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 CSADQ9Y600 493 aa6.27□□□□□ -1.41
PTPRD-214ENST00000540109 ZC3H4Q9UPT8 1303 aaKnown RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 CXCL11O14625 94 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ATF7P17544 494 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 POU5F1Q01860 360 aaKnown RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 MAPK7Q13164 816 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 TAB1Q15750 504 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 PPP6R3Q5H9R7 873 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 SNRNP48Q6IEG0 339 aaKnown RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 NSMFQ6X4W1 530 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 TRIM72Q6ZMU5 477 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 EFL1Q7Z2Z2 1120 aaKnown RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 REPS2Q8NFH8 660 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 DNAJC1Q96KC8 554 aaKnown RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 MAGEB18Q96M61 343 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 WRNIP1Q96S55 665 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 FIZ1Q96SL8 496 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ZNF184Q99676 751 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 KLHL4Q9C0H6 718 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ADA2Q9NZK5 511 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 UBA2Q9UBT2 640 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 FAM47DPA6NHR8 397 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 TSPAN4O14817 238 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 PDE9AO76083 593 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ENO2P09104 434 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 TSHRP16473 764 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 NMT1P30419 496 aaKnown RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 HOXD13P35453 343 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 IST1P53990 364 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 CACNB1Q02641 598 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 NR1D2Q14995 579 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 SLC5A9Q2M3M2 681 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 LRRC49Q8IUZ0 686 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 CASKIN2Q8WXE0 1202 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 TUBGCP5Q96RT8 1024 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 EHD1Q9H4M9 534 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 KMT5AQ9NQR1 393 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 SPATA31C2B4DYI2 1134 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 F8W8V4 182 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 SLCO1B7G3V0H7 640 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 TLR2O60603 784 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 COQ9O75208 318 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 MTA2O94776 668 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 PIGRP01833 764 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 MYCLP12524 364 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 SAT1P21673 171 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 FLT3P36888 993 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 SLC26A2P50443 739 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 PRKAA2P54646 552 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 SLC12A2P55011 1212 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ZNF211Q13398 564 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 TAF1BQ53T94 588 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 IKBIPQ70UQ0 350 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ANKRD23Q86SG2 305 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 CPXCR1Q8N123 301 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 RSAD2Q8WXG1 361 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 NLRP4Q96MN2 994 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 SIX2Q9NPC8 291 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 GPRC5DQ9NZD1 345 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 HSPBP1Q9NZL4 362 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 EMC3Q9P0I2 261 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 DMGDHQ9UI17 866 aaKnown RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 COQ4Q9Y3A0 265 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ZNF263O14978 683 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 KATNA1O75449 491 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 SOX11P35716 441 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ATP6V1E1P36543 226 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 EFNA5P52803 228 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 RUNX1T1Q06455 604 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 SPP2Q13103 211 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 KYAT1Q16773 422 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 SHROOM1Q2M3G4 852 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ZC3H12AQ5D1E8 599 aaKnown RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ZNF618Q5T7W0 954 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ATG14Q6ZNE5 492 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 RIOX2Q8IUF8 465 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 CREG2Q8IUH2 290 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 CYP2W1Q8TAV3 490 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 NT5C1BQ96P26 610 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 TAAR1Q96RJ0 339 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 WDR12Q9GZL7 423 aaKnown RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 SAYSD1Q9NPB0 183 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 VPS45Q9NRW7 570 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 FBXO28Q9NVF7 368 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ETNK2Q9NVF9 386 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ADAMTS1Q9UHI8 967 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 BARX2Q9UMQ3 279 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 TBX20Q9UMR3 447 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 BCS1LQ9Y276 419 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 RPS6KL1Q9Y6S9 549 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 ASTN2O75129 1339 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-214ENST00000540109 EPHB6O15197 1021 aa6.26□□□□□ -1.41
PTPRD-214ENST00000540109 WDR47O94967 919 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms