RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 CFAP221Q4G0U5 840 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 WDR45BQ5MNZ6 344 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 TTC38Q5R3I4 469 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 EMC10Q5UCC4 262 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 RHBDF2Q6PJF5 856 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 TMCO3Q6UWJ1 677 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 DTHD1Q6ZMT9 781 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 TMPRSS7Q7RTY8 843 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 DHX40Q8IX18 779 aaKnown RBP6.35□□□□□ -1.39
CPSF7-219ENST00000539952 RGL4Q8IZJ4 473 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 FMR1NBQ8N0W7 255 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-219ENST00000539952 TMEM86AQ8N2M4 240 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 TMEM130Q8N3G9 435 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 TXLNBQ8N3L3 684 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 GALNT15Q8N3T1 639 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 FRMD1Q8N878 549 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 RIN3Q8TB24 985 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 HMGB4Q8WW32 186 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 TSC1Q92574 1164 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 OTUB2Q96DC9 234 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 ZNF419Q96HQ0 510 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-219ENST00000539952 FUBP3Q96I24 572 aaKnown RBP eCLIP6.35□□□□□ -1.39
CPSF7-219ENST00000539952 BBC3Q96PG8 261 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-219ENST00000539952 PNMA5Q96PV4 448 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 SLC22A12Q96S37 553 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 UBL7Q96S82 380 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-219ENST00000539952 RUSC1Q9BVN2 902 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 ARHGEF4Q9NR80 690 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 TRPM5Q9NZQ8 1165 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 CWC15Q9P013 229 aaKnown RBP6.35□□□□□ -1.39
CPSF7-219ENST00000539952 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.35□□□□□ -1.394e-11■■□□□ 12.6
CPSF7-219ENST00000539952 ZNF462Q96JM2 2506 aa6.35□□□□□ -1.39
CPSF7-219ENST00000539952 NUP210Q8TEM1 1887 aaPredicted RBP6.34□□□□□ -1.39
CPSF7-219ENST00000539952 A0A087WV48 116 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 TCRBV21S2A2A0A5A6 115 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 C2orf78A6NCI8 922 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 TRABD2BA6NFA1 517 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 LEFTY2O00292 366 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 SPTLC2O15270 562 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 ARHGAP6O43182 974 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 FAM189A1O60320 539 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 HUS1O60921 280 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 DTNBO60941 627 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 ADAM23O75077 832 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 PPP6R2O75170 966 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 TADA3O75528 432 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 IL18RAPO95256 599 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 ZIC2O95409 532 aaPredicted RBP6.34□□□□□ -1.39
CPSF7-219ENST00000539952 ADH1CP00326 375 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 ZNF883P0CG24 379 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 HNRNPLP14866 589 aaKnown RBP eCLIP6.34□□□□□ -1.39
CPSF7-219ENST00000539952 H2AFXP16104 143 aaPredicted RBP6.34□□□□□ -1.39
CPSF7-219ENST00000539952 PCSK1P29120 753 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 NTSR1P30989 418 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 PRPHP41219 470 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 MAGEA11P43364 429 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 GPR15P49685 360 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 CDR1P51861 262 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 ATP2C1P98194 919 aaPredicted RBP6.34□□□□□ -1.39
CPSF7-219ENST00000539952 SLC20A2Q08357 652 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 RAD51AP2Q09MP3 1159 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 GNL2Q13823 731 aaKnown RBP6.34□□□□□ -1.39
CPSF7-219ENST00000539952 MAPRE1Q15691 268 aaKnown RBP6.34□□□□□ -1.39
CPSF7-219ENST00000539952 PLEKHG6Q3KR16 790 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 INTS6LQ5JSJ4 861 aaKnown RBP6.34□□□□□ -1.39
CPSF7-219ENST00000539952 SDHAF4Q5VUM1 108 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 BTBD8Q5XKL5 378 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 FAM173BQ6P4H8 233 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 IL27RAQ6UWB1 636 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 VSTM1Q6UX27 236 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 DBX2Q6ZNG2 339 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 C4orf50Q6ZRC1 276 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 C11orf57Q6ZUT1 292 aaPredicted RBP6.34□□□□□ -1.39
CPSF7-219ENST00000539952 DPH6Q7L8W6 267 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 ZNF605Q86T29 641 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 SLCO6A1Q86UG4 719 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 DDX42Q86XP3 938 aaKnown RBP eCLIP6.34□□□□□ -1.39
CPSF7-219ENST00000539952 SPATA2LQ8IUW3 424 aaPredicted RBP6.34□□□□□ -1.39
CPSF7-219ENST00000539952 NAXDQ8IW45 347 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 SCN4BQ8IWT1 228 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 DEFB119Q8N690 84 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 MYCT1Q8N699 235 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 AOPEPQ8N6M6 819 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 PNPLA1Q8N8W4 532 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 TRIML1Q8N9V2 468 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 LINC00301Q8NCQ3 95 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 MNS1Q8NEH6 495 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 MDM1Q8TC05 714 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 ADAM32Q8TC27 787 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 ZNF516Q92618 1163 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 C8orf76Q96K31 380 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 SPATA17Q96L03 361 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 ZNF560Q96MR9 790 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 CAMK1GQ96NX5 476 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 USP28Q96RU2 1077 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 CDC6Q99741 560 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 ARID3AQ99856 593 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 PRDM9Q9NQV7 894 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 TMLHEQ9NVH6 421 aa6.34□□□□□ -1.39
CPSF7-219ENST00000539952 DDX43Q9NXZ2 648 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms