RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 FBXO21O94952 628 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 APOC2P02655 101 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 CHKAP35790 457 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 CCL23P55773 120 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 BCAR1P56945 870 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 SLC25A52Q3SY17 297 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 PPP6R3Q5H9R7 873 aaPredicted RBP23.4■■□□□ 1.34
HOMER3-204ENST00000539827 RAB41Q5JT25 222 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 CEP85LQ5SZL2 805 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 SYPL2Q5VXT5 272 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 C1orf228Q6PIY5 440 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 LRIG3Q6UXM1 1119 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 STRADAQ7RTN6 431 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.4■■□□□ 1.34
HOMER3-204ENST00000539827 FAM129AQ9BZQ8 928 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 DHX35Q9H5Z1 703 aaKnown RBP23.4■■□□□ 1.34
HOMER3-204ENST00000539827 COX16Q9P0S2 106 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 NAALADL1Q9UQQ1 740 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 YJEFN3A6XGL0 299 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 GOLGA8KD6RF30 607 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 E7ENQ6 273 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 PITPNM1O00562 1244 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 NOS2P35228 1153 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 EIF3EP60228 445 aaKnown RBP23.4■■□□□ 1.34
HOMER3-204ENST00000539827 TSPY1Q01534 308 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 YWHAHQ04917 246 aaPredicted RBP23.4■■□□□ 1.34
HOMER3-204ENST00000539827 DMTNQ08495 405 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 TFDP2Q14188 446 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 P3H1Q32P28 736 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 TTMPQ5BVD1 217 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 ANKRD20A8PQ5CZ79 823 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 OTUD1Q5VV17 481 aaPredicted RBP23.4■■□□□ 1.34
HOMER3-204ENST00000539827 B4GALNT4Q76KP1 1039 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 FAM131BQ86XD5 332 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 ABI1Q8IZP0 508 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 SLC2A13Q96QE2 648 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 FRMD8P1Q9BZ68 369 aaPredicted RBP23.4■■□□□ 1.34
HOMER3-204ENST00000539827 ELAC1Q9H777 363 aaKnown RBP23.4■■□□□ 1.34
HOMER3-204ENST00000539827 LRFN2Q9ULH4 789 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 AP4E1Q9UPM8 1137 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 IFNB1P01574 187 aa23.39■■□□□ 1.33
HOMER3-204ENST00000539827 OR4Q2P0C623 313 aa23.39■■□□□ 1.33
HOMER3-204ENST00000539827 COL6A1P12109 1028 aa23.39■■□□□ 1.33
HOMER3-204ENST00000539827 L1CAMP32004 1257 aa23.39■■□□□ 1.33
HOMER3-204ENST00000539827 UBAP2Q5T6F2 1119 aaKnown RBP23.39■■□□□ 1.33
HOMER3-204ENST00000539827 PPP1R12CQ9BZL4 782 aa23.39■■□□□ 1.33
HOMER3-204ENST00000539827 EPB41L4BQ9H329 900 aa23.39■■□□□ 1.33
HOMER3-204ENST00000539827 POPDC2Q9HBU9 364 aa23.39■■□□□ 1.33
HOMER3-204ENST00000539827 CSNK1G1Q9HCP0 422 aa23.39■■□□□ 1.33
HOMER3-204ENST00000539827 AAASQ9NRG9 546 aa23.39■■□□□ 1.33
HOMER3-204ENST00000539827 TET1Q8NFU7 2136 aa23.39■■□□□ 1.33
HOMER3-204ENST00000539827 SCN5AQ14524 2016 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 SLC39A5Q6ZMH5 540 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 PQLC3Q8N755 202 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 PCDH19Q8TAB3 1148 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 PWWP2AQ96N64 755 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 CASD1Q96PB1 797 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 KCTD15Q96SI1 283 aaPredicted RBP23.38■■□□□ 1.33
HOMER3-204ENST00000539827 NPY6RQ99463 290 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 SEMA4AQ9H3S1 761 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 NRDE2Q9H7Z3 1164 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 PRDM10Q9NQV6 1147 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 CNGB3Q9NQW8 809 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 DNAJC17Q9NVM6 304 aaKnown RBP23.38■■□□□ 1.33
HOMER3-204ENST00000539827 TMEM189-UBE2V1I3L0A0 370 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 M0QYT0 321 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 TADA2AO75478 443 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 FYNP06241 537 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 GDF10P55107 478 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 GPS1Q13098 491 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 BBOF1Q8ND07 529 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 FAM204AQ9H8W3 233 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 HCSTQ9UBK5 93 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 STAP1Q9ULZ2 295 aa23.38■■□□□ 1.33
HOMER3-204ENST00000539827 APOL1O14791 398 aa23.37■■□□□ 1.33
HOMER3-204ENST00000539827 CAPN9O14815 690 aa23.37■■□□□ 1.33
HOMER3-204ENST00000539827 MCF2LO15068 1137 aa23.37■■□□□ 1.33
HOMER3-204ENST00000539827 ZBED1O96006 694 aa23.37■■□□□ 1.33
HOMER3-204ENST00000539827 CAV1Q03135 178 aa23.37■■□□□ 1.33
HOMER3-204ENST00000539827 SLMAPQ14BN4 828 aa23.37■■□□□ 1.33
HOMER3-204ENST00000539827 UNC45BQ8IWX7 931 aa23.37■■□□□ 1.33
HOMER3-204ENST00000539827 PYROXD2Q8N2H3 581 aa23.37■■□□□ 1.33
HOMER3-204ENST00000539827 CCHCR1Q8TD31 782 aa23.37■■□□□ 1.33
HOMER3-204ENST00000539827 HIPK3Q9H422 1215 aa23.37■■□□□ 1.33
HOMER3-204ENST00000539827 DMAP1Q9NPF5 467 aaPredicted RBP23.37■■□□□ 1.33
HOMER3-204ENST00000539827 TMPRSS4Q9NRS4 437 aa23.37■■□□□ 1.33
HOMER3-204ENST00000539827 MTMR10Q9NXD2 777 aa23.37■■□□□ 1.33
HOMER3-204ENST00000539827 DNALI1O14645 258 aaPredicted RBP23.36■■□□□ 1.33
HOMER3-204ENST00000539827 RBP3P10745 1247 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 CYP2F1P24903 491 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 ZNF844Q08AG5 666 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 NME3Q13232 169 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 NOMO1Q15155 1222 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 MAPRE1Q15691 268 aaKnown RBP23.36■■□□□ 1.33
HOMER3-204ENST00000539827 DPYSL2Q16555 572 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 SPDYCQ5MJ68 293 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 ZC3H18Q86VM9 953 aaKnown RBP23.36■■□□□ 1.33
HOMER3-204ENST00000539827 SPATA2LQ8IUW3 424 aaPredicted RBP23.36■■□□□ 1.33
HOMER3-204ENST00000539827 PLD5Q8N7P1 536 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 RSAD2Q8WXG1 361 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms