RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 MRPL42Q9Y6G3 142 aaKnown RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 RPS6KL1Q9Y6S9 549 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 SF3B1O75533 1304 aaKnown RBP eCLIP9.24□□□□□ -0.933e-6■■■■■ 137.9
DDB1-213ENST00000539332 TCRBV7S2A1N4TA0A589 114 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 SYN3O14994 580 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 ATP2C2O75185 946 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 HEXIM1O94992 359 aaKnown RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 EZRP15311 586 aaKnown RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 ATP2A2P16615 1042 aaKnown RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 NPR3P17342 541 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 NR1D1P20393 614 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 GPD1P21695 349 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 ACAT1P24752 427 aaKnown RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 PSMA2P25787 234 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 ADORA2BP29275 332 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 CHRNA3P32297 505 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 MAGEA10P43363 369 aaPredicted RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 RGS7P49802 495 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 YWHAHQ04917 246 aaPredicted RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 DHX34Q14147 1143 aaKnown RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 CCDC142Q17RM4 750 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 TTMPQ5BVD1 217 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 CEP85LQ5SZL2 805 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 SPOUT1Q5T280 376 aaKnown RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 FAM171A1Q5VUB5 890 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 OVOS1Q6IE37 1185 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 OR6B2Q6IFH4 312 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 FUT10Q6P4F1 479 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 FAM171BQ6P995 826 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 DNAJC14Q6Y2X3 702 aaPredicted RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 CCDC121Q6ZUS5 278 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 CYP4V2Q6ZWL3 525 aaPredicted RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 NLRP14Q86W24 1093 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 METTL23Q86XA0 190 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 MYCBPAPQ8TBZ2 947 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 PHOSPHO2Q8TCD6 241 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 ZNF473Q8WTR7 871 aaKnown RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 SLCO2A1Q92959 643 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 RBM41Q96IZ5 413 aaKnown RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 ZNF558Q96NG5 402 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 RUNDC3BQ96NL0 473 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 ACBD6Q9BR61 282 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 CNPY3Q9BT09 278 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 C11orf84Q9BUA3 381 aaPredicted RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 B3GNT5Q9BYG0 378 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 MTIF3Q9H2K0 278 aaKnown RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 LRRC19Q9H756 370 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 DDX56Q9NY93 547 aaKnown RBP9.24□□□□□ -0.93
DDB1-213ENST00000539332 INSL6Q9Y581 213 aa9.24□□□□□ -0.93
DDB1-213ENST00000539332 FAM187AA6NFU0 413 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 C3orf70A6NLC5 250 aaPredicted RBP9.23□□□□□ -0.93
DDB1-213ENST00000539332 RASSF9O75901 435 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 OAZ2O95190 189 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 EFEMP2O95967 443 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 RARAP10276 462 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 LAG3P18627 525 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 FGFR3P22607 806 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 FLT3P36888 993 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 MDH1P40925 334 aaKnown RBP9.23□□□□□ -0.93
DDB1-213ENST00000539332 PTPN9P43378 593 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 SLC7A5Q01650 507 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 ELAVL2Q12926 359 aaKnown RBP9.23□□□□□ -0.93
DDB1-213ENST00000539332 CRYMQ14894 314 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 SNCBQ16143 134 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 MDH1BQ5I0G3 518 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 INTS6LQ5JSJ4 861 aaKnown RBP9.23□□□□□ -0.93
DDB1-213ENST00000539332 C9orf50Q5SZB4 431 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 TXNRD3NBQ6F5E7 133 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 CLEC20AQ6ZU45 233 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 MAATS1Q7Z4T9 603 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 ANKS1BQ7Z6G8 1248 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 FAM35AQ86V20 835 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 KLHL7Q8IXQ5 586 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 GSPT2Q8IYD1 628 aaKnown RBP9.23□□□□□ -0.93
DDB1-213ENST00000539332 RCOR2Q8IZ40 523 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 IQCKQ8N0W5 287 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 EMC1Q8N766 993 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 CCDC26Q8TAB7 109 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 IGSF21Q96ID5 467 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 B3GALT6Q96L58 329 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 ATP6V1G3Q96LB4 118 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 SLITRK1Q96PX8 696 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 RAD9AQ99638 391 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 OSBPL8Q9BZF1 889 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 CSNK1G1Q9HCP0 422 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 ASNSD1Q9NWL6 643 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 AMACRQ9UHK6 382 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 MTUS1Q9ULD2 1270 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 EFR3BQ9Y2G0 817 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 CDH23Q9H251 3354 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 PLXNA4Q9HCM2 1894 aa9.23□□□□□ -0.93
DDB1-213ENST00000539332 ZSCAN5CA6NGD5 496 aaPredicted RBP9.22□□□□□ -0.93
DDB1-213ENST00000539332 TLL1O43897 1013 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 ENDOD1O94919 500 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 KRT7P08729 469 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 LINC00271P0C7V0 271 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 FAM200BP0CF97 657 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 IL1R2P27930 398 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 PTGIRP43119 386 aa9.22□□□□□ -0.93
DDB1-213ENST00000539332 SATB1Q01826 763 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms