RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CCDC186Q7Z3E2 898 aa23.4■■□□□ 1.34
SCARB1-206ENST00000539320 SFTPA1Q8IWL2 248 aa23.4■■□□□ 1.34
SCARB1-206ENST00000539320 ETFBKMTQ8IXQ9 262 aa23.4■■□□□ 1.34
SCARB1-206ENST00000539320 SLC4A11Q8NBS3 891 aa23.4■■□□□ 1.34
SCARB1-206ENST00000539320 KLF16Q9BXK1 252 aaPredicted RBP23.4■■□□□ 1.34
SCARB1-206ENST00000539320 NMUR1Q9HB89 426 aa23.4■■□□□ 1.34
SCARB1-206ENST00000539320 SPHK2Q9NRA0 654 aa23.4■■□□□ 1.34
SCARB1-206ENST00000539320 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.4■■□□□ 1.34
SCARB1-206ENST00000539320 ARMCX3Q9UH62 379 aaPredicted RBP23.4■■□□□ 1.34
SCARB1-206ENST00000539320 LSM7Q9UK45 103 aaKnown RBP23.4■■□□□ 1.34
SCARB1-206ENST00000539320 COQ4Q9Y3A0 265 aa23.4■■□□□ 1.34
SCARB1-206ENST00000539320 ANTXRLA6NF34 631 aa23.39■■□□□ 1.33
SCARB1-206ENST00000539320 RARGP13631 454 aa23.39■■□□□ 1.33
SCARB1-206ENST00000539320 RAD23BP54727 409 aa23.39■■□□□ 1.33
SCARB1-206ENST00000539320 HSF5Q4G112 596 aaPredicted RBP23.39■■□□□ 1.33
SCARB1-206ENST00000539320 KLHDC10Q6PID8 442 aa23.39■■□□□ 1.33
SCARB1-206ENST00000539320 CCDC33Q8N5R6 958 aa23.39■■□□□ 1.33
SCARB1-206ENST00000539320 NETO1Q8TDF5 533 aa23.39■■□□□ 1.33
SCARB1-206ENST00000539320 TATDN2Q93075 761 aa23.39■■□□□ 1.33
SCARB1-206ENST00000539320 TMEM176AQ96HP8 235 aa23.39■■□□□ 1.33
SCARB1-206ENST00000539320 NAGPAQ9UK23 515 aa23.39■■□□□ 1.33
SCARB1-206ENST00000539320 MDM4O15151 490 aa23.38■■□□□ 1.33
SCARB1-206ENST00000539320 FOXD2O60548 495 aaPredicted RBP23.38■■□□□ 1.33
SCARB1-206ENST00000539320 GREM1O60565 184 aa23.38■■□□□ 1.33
SCARB1-206ENST00000539320 CHRM1P11229 460 aaPredicted RBP23.38■■□□□ 1.33
SCARB1-206ENST00000539320 PSEN1P49768 467 aa23.38■■□□□ 1.33
SCARB1-206ENST00000539320 DGKEP52429 567 aa23.38■■□□□ 1.33
SCARB1-206ENST00000539320 ATXN1P54253 815 aaKnown RBP23.38■■□□□ 1.33
SCARB1-206ENST00000539320 C10orf120Q5SQS8 335 aa23.38■■□□□ 1.33
SCARB1-206ENST00000539320 ARHGAP17Q68EM7 881 aa23.38■■□□□ 1.33
SCARB1-206ENST00000539320 HTR3DQ70Z44 454 aa23.38■■□□□ 1.33
SCARB1-206ENST00000539320 TADA2BQ86TJ2 420 aa23.38■■□□□ 1.33
SCARB1-206ENST00000539320 ELOA2Q8IYF1 753 aaPredicted RBP23.38■■□□□ 1.33
SCARB1-206ENST00000539320 PHTF2Q8N3S3 785 aa23.38■■□□□ 1.33
SCARB1-206ENST00000539320 SLC35C1Q96A29 364 aa23.38■■□□□ 1.33
SCARB1-206ENST00000539320 RTKNQ9BST9 563 aa23.38■■□□□ 1.33
SCARB1-206ENST00000539320 MAN1B1Q9UKM7 699 aa23.38■■□□□ 1.33
SCARB1-206ENST00000539320 USP3Q9Y6I4 520 aa23.38■■□□□ 1.33
SCARB1-206ENST00000539320 MYO18AQ92614 2054 aaKnown RBP23.37■■□□□ 1.33
SCARB1-206ENST00000539320 KLF8O95600 359 aaPredicted RBP23.37■■□□□ 1.33
SCARB1-206ENST00000539320 TIE1P35590 1138 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 PPP1R2P41236 205 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 CUL2Q13617 745 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 CRY1Q16526 586 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 ANO4Q32M45 955 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 PLK5Q496M5 336 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 PREPLQ4J6C6 727 aaPredicted RBP23.37■■□□□ 1.33
SCARB1-206ENST00000539320 ANO7Q6IWH7 933 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 SCD5Q86SK9 330 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 TMEM25Q86YD3 366 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 ALLCQ8N6M5 410 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 DHTKD1Q96HY7 919 aaPredicted RBP23.37■■□□□ 1.33
SCARB1-206ENST00000539320 ZC3H10Q96K80 434 aaKnown RBP23.37■■□□□ 1.33
SCARB1-206ENST00000539320 CNOT6LQ96LI5 555 aaKnown RBP23.37■■□□□ 1.33
SCARB1-206ENST00000539320 ARRDC1-AS1Q9H2J1 176 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 DEC1Q9P2X7 70 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 DNMT3LQ9UJW3 386 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 NUDT5Q9UKK9 219 aa23.37■■□□□ 1.33
SCARB1-206ENST00000539320 A0A0A0MRY4 1105 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 MED19A0JLT2 244 aaPredicted RBP23.36■■□□□ 1.33
SCARB1-206ENST00000539320 TULP3O75386 442 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 RALAP11233 206 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 TNFRSF4P43489 277 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 KIR2DL1P43626 348 aaPredicted RBP23.36■■□□□ 1.33
SCARB1-206ENST00000539320 YWHAEP62258 255 aaKnown RBP23.36■■□□□ 1.33
SCARB1-206ENST00000539320 ELF2Q15723 593 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 PIGZQ86VD9 579 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 RASSF3Q86WH2 238 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 NAT16Q8N8M0 369 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 TERB1Q8NA31 727 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 IL17RCQ8NAC3 791 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 TXNDC5Q8NBS9 432 aaKnown RBP23.36■■□□□ 1.33
SCARB1-206ENST00000539320 CEP63Q96MT8 703 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 CDK5RAP1Q96SZ6 601 aaKnown RBP23.36■■□□□ 1.33
SCARB1-206ENST00000539320 TPSD1Q9BZJ3 242 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 METTL14Q9HCE5 456 aaKnown RBP23.36■■□□□ 1.33
SCARB1-206ENST00000539320 CLIC5Q9NZA1 410 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 PCDHGA5Q9Y5G8 931 aa23.36■■□□□ 1.33
SCARB1-206ENST00000539320 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.35■■□□□ 1.33
SCARB1-206ENST00000539320 DCLK1O15075 740 aa23.35■■□□□ 1.33
SCARB1-206ENST00000539320 CD44P16070 742 aaKnown RBP23.35■■□□□ 1.33
SCARB1-206ENST00000539320 SLC8A3P57103 927 aa23.35■■□□□ 1.33
SCARB1-206ENST00000539320 GOLGA7BQ2TAP0 167 aa23.35■■□□□ 1.33
SCARB1-206ENST00000539320 EOGTQ5NDL2 527 aa23.35■■□□□ 1.33
SCARB1-206ENST00000539320 ISM2Q6H9L7 571 aa23.35■■□□□ 1.33
SCARB1-206ENST00000539320 ANKRD52Q8NB46 1076 aa23.35■■□□□ 1.33
SCARB1-206ENST00000539320 MDGA1Q8NFP4 955 aa23.35■■□□□ 1.33
SCARB1-206ENST00000539320 MARK1Q9P0L2 795 aa23.35■■□□□ 1.33
SCARB1-206ENST00000539320 CNOT1A5YKK6 2376 aaKnown RBP23.34■■□□□ 1.33
SCARB1-206ENST00000539320 TBC1D3BA6NDS4 549 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 NEDD8-MDP1E9PL57 170 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 SGK1O00141 431 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 SLC30A4O14863 429 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 ALDH1A2O94788 518 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 HNRNPLP14866 589 aaKnown RBP eCLIP23.34■■□□□ 1.331e-7■■■■□ 23.1
SCARB1-206ENST00000539320 PLA2G4AP47712 749 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 CCDC40Q4G0X9 1142 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 EMC10Q5UCC4 262 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 GRAMD4Q6IC98 578 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 KLHL10Q6JEL2 608 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms