RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 TAZQ16635 292 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 THNSL1Q8IYQ7 743 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 HIPK4Q8NE63 616 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 GAB3Q8WWW8 586 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 CFAP36Q96G28 342 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 ZDHHC15Q96MV8 337 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 DNAJA2O60884 412 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 SIN3BO75182 1162 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 KRT38O76015 456 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 LSM8O95777 96 aaKnown RBP19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 KRT7P08729 469 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 CRHR1P34998 444 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 JAG1P78504 1218 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 CBLBQ13191 982 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 NIPA1Q7RTP0 329 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 AHI1Q8N157 1196 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 BSNDQ8WZ55 320 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 USP6NLQ92738 828 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 APOL6Q9BWW8 343 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 IDI2Q9BXS1 227 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 AGO4Q9HCK5 861 aaKnown RBP19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 UBAP1Q9NZ09 502 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 C6orf203Q9P0P8 240 aaPredicted RBP19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 KAT6AQ92794 2004 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 PPEF1O14829 653 aaPredicted RBP19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 EXTL3O43909 919 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 TNFAIP8O95379 198 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 EIF3EP60228 445 aaKnown RBP19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 SLC25A11Q02978 314 aaKnown RBP19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 SMTNL2Q2TAL5 461 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 BORAQ6PGQ7 559 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 ZCCHC23Q6ZST2 131 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 NLGN1Q8N2Q7 840 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 FBXW8Q8N3Y1 598 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 DIS3LQ8TF46 1054 aaKnown RBP19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 CMTM5Q96DZ9 223 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 DCUN1D1Q96GG9 259 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 GRIP2Q9C0E4 1043 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 ZNF696Q9H7X3 374 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 NRDE2Q9H7Z3 1164 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 CYP4F11Q9HBI6 524 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 ANKEF1Q9NU02 776 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 RAB26Q9ULW5 256 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 TELO2Q9Y4R8 837 aa19.27■□□□□ 0.68
SFSWAP-207ENST00000538548 CXorf49A8MYA2 514 aaPredicted RBP19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 APOC4-APOC2K7ER74 178 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 TRDMT1O14717 391 aaKnown RBP19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 MCF2LO15068 1137 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 APOC2P02655 101 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 FAM163BP0C2L3 166 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 KDELR1P24390 212 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 PRKCHP24723 683 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 EMP3P54852 163 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 HPS6Q86YV9 775 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 LRRC43Q8N309 656 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 SAMD3Q8N6K7 520 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 GFM2Q969S9 779 aaKnown RBP19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 SENP6Q9GZR1 1112 aaPredicted RBP19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 DHX33Q9H6R0 707 aaKnown RBP19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 SLC9A2Q9UBY0 812 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 SLX4Q8IY92 1834 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 CHADO15335 359 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 CD48P09326 243 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 RBP3P10745 1247 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 MYLK3Q32MK0 819 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 TCHHL1Q5QJ38 904 aaPredicted RBP19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 DEFB107AQ8IZN7 70 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 NDUFAF2Q8N183 169 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 PQLC1Q8N2U9 271 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 PSMD13Q9UNM6 376 aa19.26■□□□□ 0.67
SFSWAP-207ENST00000538548 AVILO75366 819 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 MYL4P12829 197 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 ACAT1P24752 427 aaKnown RBP19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 BMPR2Q13873 1038 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 CNGA3Q16281 694 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 KCNT1Q5JUK3 1230 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 MAP7D3Q8IWC1 876 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 PPP1R14CQ8TAE6 165 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 BTBD7Q9P203 1132 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 DNAJC16Q9Y2G8 782 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 FAM189A1O60320 539 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 ITGAXP20702 1163 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 HOXA10P31260 410 aaPredicted RBP19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 SERPINB8P50452 374 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 ZNF132P52740 706 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 KRT81Q14533 505 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 TKFCQ3LXA3 575 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 DDI1Q8WTU0 396 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 ZNF778Q96MU6 729 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 FRMD8Q9BZ67 464 aaPredicted RBP19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 ZC3H12CQ9C0D7 883 aaKnown RBP19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 THEGQ9P2T0 379 aa19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 ZC3H7BQ9UGR2 993 aaKnown RBP19.25■□□□□ 0.67
SFSWAP-207ENST00000538548 SPDYE2BA6NHP3 402 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 TOM1L1O75674 476 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 SPDYE6P0CI01 402 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 PSMA2P25787 234 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 IL1R2P27930 398 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 MTTPP55157 894 aa19.24■□□□□ 0.67
SFSWAP-207ENST00000538548 YWHAZP63104 245 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms