RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 DOLKQ9UPQ8 538 aa11.79□□□□□ -0.52
SEMA4D-221ENST00000537934 SOBPA7XYQ1 873 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 PRR5-ARHGAP8B1AHC4 643 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 H3BNX3 289 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 SPTLC1O15269 473 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 LPXNO60711 386 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 OCM2P0CE71 109 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 OCMP0CE72 109 aaPredicted RBP11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 AOC1P19801 751 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 HSD17B4P51659 736 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 ARHGAP8P85298 464 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 RABGAP1LQ5R372 815 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 HP1BP3Q5SSJ5 553 aaPredicted RBP11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 SNRNP48Q6IEG0 339 aaKnown RBP11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 PAOXQ6QHF9 649 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 DCDC5Q6ZRR9 648 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 TRPC4APQ8TEL6 797 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 CNBD2Q96M20 576 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 NLRP4Q96MN2 994 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 DHRS4Q9BTZ2 278 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 SMYD3Q9H7B4 428 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 ACP6Q9NPH0 428 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 C6orf203Q9P0P8 240 aaPredicted RBP11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 ADAMTS5Q9UNA0 930 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 SORCS3Q9UPU3 1222 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 AP4B1Q9Y6B7 739 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 NFASCO94856 1347 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 E5RJQ4 531 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 GOLGA8RI6L899 631 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 SERPINA6P08185 405 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 C6orf222P0C671 652 aaPredicted RBP11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 ZNF23P17027 643 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 ZNF76P36508 570 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 STAT3P40763 770 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 RPS6P62753 249 aaKnown RBP11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 SLC25A3Q00325 362 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 KLF1Q13351 362 aaPredicted RBP11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 ACAP1Q15027 740 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 LPCAT2Q7L5N7 544 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 IL31RAQ8NI17 732 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 C7orf26Q96N11 449 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 NRDE2Q9H7Z3 1164 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 CNTN3Q9P232 1028 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 GTF3C4Q9UKN8 822 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 PPME1Q9Y570 386 aa11.78□□□□□ -0.52
SEMA4D-221ENST00000537934 IGLV3-22A0A075B6J6 115 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 GOLGA8TH3BQL2 631 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 ATP2A1O14983 1001 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 TGFB1I1O43294 461 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 CIITAP33076 1130 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 NFIL3Q16649 462 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 ANKDD1AQ495B1 522 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 RWDD4Q6NW29 188 aaKnown RBP11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 MOXD1Q6UVY6 613 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 NSMFQ6X4W1 530 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 GSTA5Q7RTV2 222 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 KBTBD6Q86V97 674 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 POU5F2Q8N7G0 328 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 TTC17Q96AE7 1141 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 LIN28AQ9H9Z2 209 aaKnown RBP11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 RNF146Q9NTX7 359 aa11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 SCHIP1Q9P0W5 487 aaPredicted RBP11.77□□□□□ -0.52
SEMA4D-221ENST00000537934 MYH11P35749 1972 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 MEI4A8MW99 385 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 MSH4O15457 936 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 CYP3A4P08684 503 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 ALDH3B2P48448 385 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 ALDH18A1P54886 795 aaKnown RBP11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 GPX6P59796 221 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 MYL7Q01449 175 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 SYTL5Q8TDW5 730 aaPredicted RBP11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 ACTRT2Q8TDY3 377 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 BORCS5Q969J3 196 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 KLF6Q99612 283 aaPredicted RBP11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 REEP2Q9BRK0 252 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 NMRK2Q9NPI5 230 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 SLC38A7Q9NVC3 462 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 IGSF9Q9P2J2 1179 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 GIT1Q9Y2X7 761 aa11.77□□□□□ -0.53
SEMA4D-221ENST00000537934 SF3B1O75533 1304 aaKnown RBP eCLIP11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 A0A0G2JLL6 359 aaPredicted RBP11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 MYOCOSA0A1B0GUC4 107 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 KRT38O76015 456 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 TFPTP0C1Z6 253 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 PHBP35232 272 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 GJA5P36382 358 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 GK3PQ14409 553 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 MORF4L2Q15014 288 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 NIPAL1Q6NVV3 410 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 PRRT2Q7Z6L0 340 aaPredicted RBP11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 TMEM126BQ8IUX1 230 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 PQLC1Q8N2U9 271 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 CATSPER1Q8NEC5 780 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 LMO3Q8TAP4 145 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 USP6NLQ92738 828 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 SGF29Q96ES7 293 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 FAM111AQ96PZ2 611 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 TAAR1Q96RJ0 339 aa11.76□□□□□ -0.53
SEMA4D-221ENST00000537934 PAFAH2Q99487 392 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms