RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 TCF25Q9BQ70 676 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 EMILIN2Q9BXX0 1053 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 ALG13Q9NP73 1137 aaKnown RBP12.9□□□□□ -0.34
DDB1-209ENST00000537877 TMEM51Q9NW97 253 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 USP18Q9UMW8 372 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 YIPF1Q9Y548 306 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.89□□□□□ -0.35
DDB1-209ENST00000537877 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.89□□□□□ -0.35
DDB1-209ENST00000537877 SLC38A8A6NNN8 435 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 GRXCR1A8MXD5 290 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 LPXNO60711 386 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 SOAT2O75908 522 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 ARHGEF15O94989 841 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 ZRANB2O95218 330 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDB1-209ENST00000537877 SEC24AO95486 1093 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 CXCL14O95715 111 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 TRUB2O95900 331 aaKnown RBP12.89□□□□□ -0.35
DDB1-209ENST00000537877 C1RP00736 705 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 KRT1P04264 644 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 FYNP06241 537 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 NCAM1P13591 858 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 MYOGP15173 224 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 TCF4P15884 667 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 RDXP35241 583 aaKnown RBP12.89□□□□□ -0.35
DDB1-209ENST00000537877 GJC1P36383 396 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 ALDH1A3P47895 512 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 HDAC4P56524 1084 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 COPS2P61201 443 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 IFRD2Q12894 506 aaPredicted RBP12.89□□□□□ -0.35
DDB1-209ENST00000537877 PLD1Q13393 1074 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 VEPH1Q14D04 833 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 BTBD8Q5XKL5 378 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 PDE12Q6L8Q7 609 aaKnown RBP12.89□□□□□ -0.35
DDB1-209ENST00000537877 MYRIPQ8NFW9 859 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 OVCA2Q8WZ82 227 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 FBXO32Q969P5 355 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 CYP4F11Q9HBI6 524 aa12.89□□□□□ -0.35
DDB1-209ENST00000537877 PDE2AO00408 941 aaPredicted RBP12.88□□□□□ -0.35
DDB1-209ENST00000537877 PRRG1O14668 218 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 FSCN2O14926 492 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 MDM4O15151 490 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 F9P00740 461 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 PYGMP11217 842 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 IL1R2P27930 398 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 PTPN7P35236 360 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 TERF1P54274 439 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 USP46P62068 366 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 TUBB4BP68371 445 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 ZNF211Q13398 564 aaPredicted RBP12.88□□□□□ -0.35
DDB1-209ENST00000537877 BOLA3Q53S33 107 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 ODF2Q5BJF6 829 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 ZFYVE27Q5T4F4 411 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 SH3PXD2AQ5TCZ1 1133 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 OTUD1Q5VV17 481 aaPredicted RBP12.88□□□□□ -0.35
DDB1-209ENST00000537877 SYPL2Q5VXT5 272 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 MSANTD2Q6P1R3 559 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 SCD5Q86SK9 330 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 RCOR2Q8IZ40 523 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 MRPL43Q8N983 215 aaKnown RBP12.88□□□□□ -0.35
DDB1-209ENST00000537877 PDZD8Q8NEN9 1154 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 MAIP1Q8WWC4 291 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 TRMT2BQ96GJ1 504 aaKnown RBP12.88□□□□□ -0.35
DDB1-209ENST00000537877 MS4A14Q96JA4 679 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 KLHL5Q96PQ7 755 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 SLITRK1Q96PX8 696 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 ZWILCHQ9H900 591 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 TLR8Q9NR97 1041 aaKnown RBP12.88□□□□□ -0.35
DDB1-209ENST00000537877 CLIC5Q9NZA1 410 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 MSRAQ9UJ68 235 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 FBXW11Q9UKB1 542 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 NAALADL1Q9UQQ1 740 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 YBX2Q9Y2T7 364 aaKnown RBP12.88□□□□□ -0.35
DDB1-209ENST00000537877 INSL5Q9Y5Q6 135 aa12.88□□□□□ -0.35
DDB1-209ENST00000537877 ZNF638Q14966 1978 aaKnown RBP12.88□□□□□ -0.35
DDB1-209ENST00000537877 MKI67P46013 3256 aaKnown RBP12.87□□□□□ -0.35
DDB1-209ENST00000537877 A0A1W2PQH9 124 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 C2orf71A6NGG8 1288 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 EFCAB8A8MWE9 144 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 H3BNC9 293 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 M0QYT0 321 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 TADA3O75528 432 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 FGGP02679 453 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 TFE3P19532 575 aaPredicted RBP12.87□□□□□ -0.35
DDB1-209ENST00000537877 BMP8BP34820 402 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 AIF1P55008 147 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 ERVFC1P60507 584 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 DEUP1Q05D60 604 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 PPP2R5EQ16537 467 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 PLPP4Q5VZY2 271 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 TXNRD3NBQ6F5E7 133 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 LILRA6Q6PI73 481 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 CCDC149Q6ZUS6 474 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 CYP4V2Q6ZWL3 525 aaPredicted RBP12.87□□□□□ -0.35
DDB1-209ENST00000537877 RTL10Q7L3V2 364 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 VSIG1Q86XK7 387 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 PSTKQ8IV42 348 aaKnown RBP12.87□□□□□ -0.35
DDB1-209ENST00000537877 CCDC50Q8IVM0 306 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 STKLD1Q8NE28 680 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 SLC7A14Q8TBB6 771 aa12.87□□□□□ -0.35
DDB1-209ENST00000537877 GPR152Q8TDT2 470 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms