RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 ROPN1BQ9BZX4 212 aaPredicted RBP18.19■□□□□ 0.5
SNX17-210ENST00000537606 ROPN1Q9HAT0 212 aaPredicted RBP18.19■□□□□ 0.5
SNX17-210ENST00000537606 MLXIPLQ9NP71 852 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 TMPRSS4Q9NRS4 437 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 KRT82Q9NSB4 513 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 DDX20Q9UHI6 824 aaKnown RBP18.19■□□□□ 0.5
SNX17-210ENST00000537606 GIT1Q9Y2X7 761 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 ACADSBP45954 432 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 NOGQ13253 232 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 MORF4L2Q15014 288 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 TIGD5Q53EQ6 642 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 DCAF6Q58WW2 860 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 FAM131BQ86XD5 332 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 ANKMY2Q8IV38 441 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 ZBED8Q8IZ13 594 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 PYROXD2Q8N2H3 581 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 CPT1BQ92523 772 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 PRCCQ92733 491 aaPredicted RBP18.19■□□□□ 0.5
SNX17-210ENST00000537606 PRMT1Q99873 361 aaKnown RBP18.19■□□□□ 0.5
SNX17-210ENST00000537606 C11orf84Q9BUA3 381 aaPredicted RBP18.19■□□□□ 0.5
SNX17-210ENST00000537606 RHOBTB2Q9BYZ6 727 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 TMEM30AQ9NV96 361 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.19■□□□□ 0.5
SNX17-210ENST00000537606 B3GAT3O94766 335 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 DESP17661 470 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 BRCC3P46736 316 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 CACNA2D1P54289 1103 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 SLC8A3P57103 927 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 NKX3-2P78367 333 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 ROR1Q01973 937 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 IFT88Q13099 833 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 TFDP2Q14188 446 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 PDK2Q15119 407 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 NOMO1Q15155 1222 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 HFE2Q6ZVN8 426 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 CCDC13Q8IYE1 715 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 PCED1BQ96HM7 432 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 SYT15Q9BQS2 421 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 LRRC4Q9HBW1 653 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 INTS9Q9NV88 658 aaKnown RBP18.18■□□□□ 0.5
SNX17-210ENST00000537606 F8W810 466 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 PTPN9P43378 593 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 LIG3P49916 1009 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 BCAR1P56945 870 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 BASP1P80723 227 aaKnown RBP18.18■□□□□ 0.5
SNX17-210ENST00000537606 PDIA2Q13087 525 aaKnown RBP18.18■□□□□ 0.5
SNX17-210ENST00000537606 UPP1Q16831 310 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 RPAINQ86UA6 219 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 CENPIQ92674 756 aaPredicted RBP18.18■□□□□ 0.5
SNX17-210ENST00000537606 HHIPL1Q96JK4 782 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 CAPNS2Q96L46 248 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 FRMD8P1Q9BZ68 369 aaPredicted RBP18.18■□□□□ 0.5
SNX17-210ENST00000537606 DNAI2Q9GZS0 605 aa18.18■□□□□ 0.5
SNX17-210ENST00000537606 FARP1Q9Y4F1 1045 aaPredicted RBP18.18■□□□□ 0.5
SNX17-210ENST00000537606 SRRM3A6NNA2 597 aaPredicted RBP18.17■□□□□ 0.5
SNX17-210ENST00000537606 APOL1O14791 398 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 DRD4P21917 467 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 L1CAMP32004 1257 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 SULT1E1P49888 294 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 SYPL2Q5VXT5 272 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 MRPL10Q7Z7H8 261 aaKnown RBP18.17■□□□□ 0.5
SNX17-210ENST00000537606 TEKT4Q8WW24 435 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 SERPINB12Q96P63 405 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 AP4E1Q9UPM8 1137 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 CYP2F1P24903 491 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 TKTL1P51854 596 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 ACLYP53396 1101 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 MRPS5P82675 430 aaKnown RBP18.17■□□□□ 0.5
SNX17-210ENST00000537606 MSS51Q4VC12 460 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 FNBP1LQ5T0N5 605 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 GPRIN1Q7Z2K8 1008 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 CPLX4Q7Z7G2 160 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 CROCCP2Q86T23 111 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 PCSK9Q8NBP7 692 aaKnown RBP18.17■□□□□ 0.5
SNX17-210ENST00000537606 NETO2Q8NC67 525 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 MRRFQ96E11 262 aaKnown RBP18.17■□□□□ 0.5
SNX17-210ENST00000537606 TRPV6Q9H1D0 765 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 MFHAS1Q9Y4C4 1052 aa18.17■□□□□ 0.5
SNX17-210ENST00000537606 A0A0U1RQF3 1178 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 NRP1O14786 923 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 MDM4O15151 490 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 KCNN4O15554 427 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 AP1G2O75843 785 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 FAM200BP0CF97 657 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 MATKP42679 507 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 EFHC1Q5JVL4 640 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 PPIL6Q8IXY8 311 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 SIX6OS1Q8N1H7 587 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 CHMP6Q96FZ7 201 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 SEC16BQ96JE7 1060 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 ZNF317Q96PQ6 595 aaPredicted RBP18.16■□□□□ 0.5
SNX17-210ENST00000537606 KCTD15Q96SI1 283 aaPredicted RBP18.16■□□□□ 0.5
SNX17-210ENST00000537606 SMOQ99835 787 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 MTMR10Q9NXD2 777 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 SRRDQ9UH36 339 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 NAALADL1Q9UQQ1 740 aa18.16■□□□□ 0.5
SNX17-210ENST00000537606 TMEM120BA0PK00 339 aa18.15■□□□□ 0.5
SNX17-210ENST00000537606 PIAS1O75925 651 aa18.15■□□□□ 0.5
SNX17-210ENST00000537606 TMEM63AO94886 807 aa18.15■□□□□ 0.5
SNX17-210ENST00000537606 YY1P25490 414 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms