RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 ZNF592Q92610 1267 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 TBCBQ99426 244 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 DDX23Q9BUQ8 820 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 IGFLR1Q9H665 355 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 ASNSD1Q9NWL6 643 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 HCFC1R1Q9NWW0 138 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 IP6K2Q9UHH9 426 aa16.38■□□□□ 0.21
SFSWAP-206ENST00000537582 A0A1W2PPC1 479 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 DPYSL4O14531 572 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 LINC01565O15544 149 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 SART1O43290 800 aaKnown RBP16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 ZMYND10O75800 440 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 LRG1P02750 347 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 GLI1P08151 1106 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 CSH1P0DML2 217 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 CSH2P0DML3 217 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 VEPH1Q14D04 833 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 TCEAL5Q5H9L2 206 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 PPM1LQ5SGD2 360 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 TXNRD3NBQ6F5E7 133 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 TMEM150AQ86TG1 271 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 C12orf76Q8N812 135 aaPredicted RBP16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 KRT35Q92764 455 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 PSMG2Q969U7 264 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 FAM161BQ96MY7 647 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 PSMB7Q99436 277 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 CNPY3Q9BT09 278 aa16.37■□□□□ 0.21
SFSWAP-206ENST00000537582 SYNJ2BP-COX16A0A087WUM0 186 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 CAPN9O14815 690 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 MDM4O15151 490 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 LRCH4O75427 683 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 TBX18O95935 607 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 SDC4P31431 198 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 SULT1E1P49888 294 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 TERF1P54274 439 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 HYAL1Q12794 435 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 TAF12Q16514 161 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 MEI1Q5TIA1 1274 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 ARCQ7LC44 396 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 PEX26Q7Z412 305 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 MON1AQ86VX9 555 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 TMC8Q8IU68 726 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 NIPA2Q8N8Q9 360 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 FNIP1Q8TF40 1166 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 FAM172AQ8WUF8 416 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 ACSF2Q96CM8 615 aaPredicted RBP16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 MYRFLQ96LU7 910 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 NPY6RQ99463 290 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 TLR10Q9BXR5 811 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 LRRC3Q9BY71 257 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 IL21Q9HBE4 155 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 COX16Q9P0S2 106 aa16.36■□□□□ 0.21
SFSWAP-206ENST00000537582 SPOPO43791 374 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 GLP2RO95838 553 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 ZDHHC11BP0C7U3 371 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 IL1R2P27930 398 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 NOS2P35228 1153 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 GJC1P36383 396 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 SSR1P43307 286 aaKnown RBP16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 HDAC4P56524 1084 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 KCNC3Q14003 757 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 ADGRE1Q14246 886 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 PIGHQ14442 188 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 BTBD8Q5XKL5 378 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 CC2D1AQ6P1N0 951 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 TAC4Q86UU9 113 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 GOLGA1Q92805 767 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 CASP10Q92851 521 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 CD101Q93033 1021 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 TRMT2BQ96GJ1 504 aaKnown RBP16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 CEP295NLQ96MC4 621 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 ZNF512Q96ME7 567 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 PEBP4Q96S96 227 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 PLEKHA4Q9H4M7 779 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 CCSER2Q9H7U1 834 aa16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 ZNF638Q14966 1978 aaKnown RBP16.35■□□□□ 0.21
SFSWAP-206ENST00000537582 ZNF840PA6NDX5 716 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 M0QYT0 321 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 MSI1O43347 362 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 RARGP13631 454 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 GJA1P17302 382 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 CASQ1P31415 396 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 MAN1A1P33908 653 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 PTPN9P43378 593 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 NTHL1P78549 312 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 NME3Q13232 169 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 SLC25A52Q3SY17 297 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 ATP13A4Q4VNC1 1196 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 PRPF38BQ5VTL8 546 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 SYCE1Q8N0S2 351 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 DQX1Q8TE96 717 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 ALG3Q92685 438 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 NT5C3BQ969T7 300 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 SLITRK1Q96PX8 696 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 CORO1BQ9BR76 489 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 NSUN3Q9H649 340 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 TLR8Q9NR97 1041 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 ABCC13Q9NSE7 274 aa16.34■□□□□ 0.21
SFSWAP-206ENST00000537582 KLHL11Q9NVR0 708 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms