RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 DUS2Q9NX74 493 aaKnown RBP23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 GTSE1Q9NYZ3 720 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 DNMT3LQ9UJW3 386 aa23.85■■□□□ 1.41
SFSWAP-204ENST00000535399 GFPT2O94808 682 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 FBXO21O94952 628 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 GLULP15104 373 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 ACADSBP45954 432 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 MLLT6P55198 1093 aaPredicted RBP23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 PDCLQ13371 301 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 BSPRYQ5W0U4 402 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 TADA2BQ86TJ2 420 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 TMEM110Q86TL2 294 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 NOP9Q86U38 636 aaKnown RBP23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 TTC8Q8TAM2 541 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 EPS8L1Q8TE68 723 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 CLEC4CQ8WTT0 213 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 WBP2Q969T9 261 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 SPAG5Q96R06 1193 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 CDK5RAP1Q96SZ6 601 aaKnown RBP23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 LINC00597Q9H2U6 94 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 EBF3Q9H4W6 596 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 ST7Q9NRC1 585 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 PIAS3Q9Y6X2 628 aa23.84■■□□□ 1.41
SFSWAP-204ENST00000535399 F5P12259 2224 aa23.83■■□□□ 1.41
SFSWAP-204ENST00000535399 A0A1W2PQC6 194 aa23.83■■□□□ 1.41
SFSWAP-204ENST00000535399 OTOL1A6NHN0 477 aaPredicted RBP23.83■■□□□ 1.41
SFSWAP-204ENST00000535399 STAT1P42224 750 aa23.83■■□□□ 1.41
SFSWAP-204ENST00000535399 IFNAR2P48551 515 aa23.83■■□□□ 1.41
SFSWAP-204ENST00000535399 CLCN5P51795 746 aa23.83■■□□□ 1.41
SFSWAP-204ENST00000535399 VCPP55072 806 aaKnown RBP23.83■■□□□ 1.41
SFSWAP-204ENST00000535399 RUNX3Q13761 415 aa23.83■■□□□ 1.41
SFSWAP-204ENST00000535399 EML3Q32P44 896 aa23.83■■□□□ 1.41
SFSWAP-204ENST00000535399 ITPRIPL2Q3MIP1 535 aa23.83■■□□□ 1.41
SFSWAP-204ENST00000535399 ASTLQ6HA08 431 aaPredicted RBP23.83■■□□□ 1.41
SFSWAP-204ENST00000535399 SUGP1Q8IWZ8 645 aaKnown RBP23.83■■□□□ 1.41
SFSWAP-204ENST00000535399 MIS12Q9H081 205 aa23.83■■□□□ 1.41
SFSWAP-204ENST00000535399 COL4A3Q01955 1670 aa23.83■■□□□ 1.4
SFSWAP-204ENST00000535399 COL4A2P08572 1712 aa23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 KIF26AQ9ULI4 1882 aaPredicted RBP23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 E2F8A0AVK6 867 aa23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 E5RJQ4 531 aa23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 SCAMP3O14828 347 aaKnown RBP23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 CD72P21854 359 aa23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 SOX9P48436 509 aa23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 KPNA1P52294 538 aaPredicted RBP23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 ZNF445P59923 1031 aa23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 TAF3Q5VWG9 929 aa23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 BTBD8Q5XKL5 378 aa23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 SCUBE3Q8IX30 993 aa23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 C1orf131Q8NDD1 294 aaKnown RBP23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 CPXM1Q96SM3 734 aa23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 FOXQ1Q9C009 403 aa23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 C8orf33Q9H7E9 229 aaPredicted RBP23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 TJP2Q9UDY2 1190 aa23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 NOCTQ9UK39 431 aaKnown RBP23.82■■□□□ 1.4
SFSWAP-204ENST00000535399 KANSL1LA0AUZ9 987 aa23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 STK25O00506 426 aa23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 PAPSS1O43252 624 aaPredicted RBP23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 PI15O43692 258 aa23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 GREM1O60565 184 aa23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 IRF1P10914 325 aa23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 AOC1P19801 751 aa23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 CDH5P33151 784 aaPredicted RBP23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 ZNF852Q6ZMS4 543 aa23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 RSRC2Q7L4I2 434 aaKnown RBP23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 TMEM105Q8N8V8 129 aa23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 EDEM1Q92611 657 aa23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 ATP2A3Q93084 1043 aa23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 MSANTD3Q96H12 275 aa23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 RASAL2Q9UJF2 1139 aa23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 MTF2Q9Y483 593 aaPredicted RBP23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 MYO16Q9Y6X6 1858 aa23.81■■□□□ 1.4
SFSWAP-204ENST00000535399 SPECC1L-ADORA2AF8WAN1 911 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 MAN2B1O00754 1011 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 LTFP02788 710 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 MMEP08473 750 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 AVPR2P30518 371 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 CTHP32929 405 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 UBASH3AP57075 661 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 EFEMP1Q12805 493 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 MIB1Q86YT6 1006 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 ZNF687Q8N1G0 1237 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 PJA1Q8NG27 643 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 SLC20A1Q8WUM9 679 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 BAP1Q92560 729 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 PPP1R13BQ96KQ4 1090 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 ECT2Q9H8V3 914 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 LTB4R2Q9NPC1 389 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 ABCC13Q9NSE7 274 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 MARCH2Q9P0N8 246 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 SH3BP1Q9Y3L3 701 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 CEP83Q9Y592 693 aa23.8■■□□□ 1.4
SFSWAP-204ENST00000535399 SLC9A3R1O14745 358 aaPredicted RBP23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 SART1O43290 800 aaKnown RBP23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 CHRNB2P17787 502 aa23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 TARSP26639 723 aaKnown RBP23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 PBX1P40424 430 aa23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 PTPN20Q4JDL3 420 aa23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 MSANTD2Q6P1R3 559 aa23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 TXNDC11Q6PKC3 985 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms