RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 AGPAT1Q99943 283 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 FAM49AQ9H0Q0 323 aaPredicted RBP9.4□□□□□ -0.91
SF3B2-216ENST00000534765 VTA1Q9NP79 307 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 TRNAU1APQ9NX07 287 aaKnown RBP9.4□□□□□ -0.91
SF3B2-216ENST00000534765 TLL2Q9Y6L7 1015 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 THSD7BQ9C0I4 1608 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 TSPAN1O60635 241 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 WEE2P0C1S8 567 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 TNNI1P19237 187 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 STAT1P42224 750 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 ARFIP2P53365 341 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 TNFAIP2Q03169 654 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 RALGDSQ12967 914 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 SLC10A6Q3KNW5 377 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 RAB6CQ53S08 254 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 HP1BP3Q5SSJ5 553 aaPredicted RBP9.39□□□□□ -0.91
SF3B2-216ENST00000534765 SLC2A7Q6PXP3 512 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 SCARA5Q6ZMJ2 495 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 EXOC3L1Q86VI1 746 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 SESTD1Q86VW0 696 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 TREML1Q86YW5 311 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 KIAA2013Q8IYS2 634 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 ARHGAP24Q8N264 748 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 UBR7Q8N806 425 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 TFAP2BQ92481 460 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 KCNN1Q92952 543 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 RAB6CQ9H0N0 254 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 TMEM134Q9H6X4 195 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 THAP12O43422 761 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 STRNO43815 780 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 DCTN3O75935 186 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 ATP5HO75947 161 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 PENKP01210 267 aaPredicted RBP9.39□□□□□ -0.91
SF3B2-216ENST00000534765 SMIM10L2AP0DMW4 78 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 SMIM10L2BP0DMW5 78 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 ELNP15502 786 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 RXRGP48443 463 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 ALCAMQ13740 583 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 TMEM259Q4ZIN3 620 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 IER5Q5VY09 327 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 ARHGEF18Q6ZSZ5 1173 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 ZNF467Q7Z7K2 595 aaPredicted RBP9.39□□□□□ -0.91
SF3B2-216ENST00000534765 TLK2Q86UE8 772 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 ECHDC2Q86YB7 292 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 WDTC1Q8N5D0 677 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 ARRDC4Q8NCT1 418 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 FBXO25Q8TCJ0 367 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 SLC26A7Q8TE54 656 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 OSMRQ99650 979 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 CEP44Q9C0F1 390 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 SCINQ9Y6U3 715 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 ZNF638Q14966 1978 aaKnown RBP9.39□□□□□ -0.91
SF3B2-216ENST00000534765 CLDN3O15551 220 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 KRT75O95678 551 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 ATP5DP30049 168 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 CCND3P30281 292 aaPredicted RBP9.39□□□□□ -0.91
SF3B2-216ENST00000534765 PLOD1Q02809 727 aaPredicted RBP9.39□□□□□ -0.91
SF3B2-216ENST00000534765 LSAMPQ13449 338 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 CNGA2Q16280 664 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 KYNUQ16719 465 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 UBAP2Q5T6F2 1119 aaKnown RBP9.39□□□□□ -0.91
SF3B2-216ENST00000534765 B3GNT6Q6ZMB0 384 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 STXBP4Q6ZWJ1 553 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 IQCF2Q8IXL9 164 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 C1orf127Q8N9H9 656 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 SMYD1Q8NB12 490 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 GABPB2Q8TAK5 448 aaPredicted RBP9.39□□□□□ -0.91
SF3B2-216ENST00000534765 TMC2Q8TDI7 906 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 PAIP1Q9H074 479 aaKnown RBP9.39□□□□□ -0.91
SF3B2-216ENST00000534765 KLHL25Q9H0H3 589 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 ERVK-5Q9HDB9 667 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 CNGB3Q9NQW8 809 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 RNF186Q9NXI6 227 aa9.39□□□□□ -0.91
SF3B2-216ENST00000534765 LACTBL1A8MY62 500 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 CLPTM1O96005 669 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 AGTP01019 485 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 FTLP02792 175 aaPredicted RBP9.38□□□□□ -0.91
SF3B2-216ENST00000534765 NAT2P11245 290 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 GM2AP17900 193 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 PHEXP78562 749 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 PRKCZQ05513 592 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 KDSRQ06136 332 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 STRN3Q13033 797 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 LAMC2Q13753 1193 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 TRIP10Q15642 601 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 ATF7IP2Q5U623 682 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 JADE1Q6IE81 842 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 DUS1LQ6P1R4 473 aaKnown RBP9.38□□□□□ -0.91
SF3B2-216ENST00000534765 MTDHQ86UE4 582 aaKnown RBP9.38□□□□□ -0.91
SF3B2-216ENST00000534765 MRPL1Q9BYD6 325 aaKnown RBP9.38□□□□□ -0.91
SF3B2-216ENST00000534765 KLHL4Q9C0H6 718 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 AKT3Q9Y243 479 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 SCN10AQ9Y5Y9 1956 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 DDX3YO15523 660 aaKnown RBP9.38□□□□□ -0.91
SF3B2-216ENST00000534765 HBP1O60381 514 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 TOM1L1O75674 476 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 PSMG1O95456 288 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 OCM2P0CE71 109 aa9.38□□□□□ -0.91
SF3B2-216ENST00000534765 OCMP0CE72 109 aaPredicted RBP9.38□□□□□ -0.91
SF3B2-216ENST00000534765 ALADP13716 330 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms