RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 HTR1BP28222 390 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 PCSK6P29122 969 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 ZNF134P52741 427 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 SRSF4Q08170 494 aaKnown RBP4.78□□□□□ -1.64
ITGB1-219ENST00000534049 EIF2B5Q13144 721 aaKnown RBP4.78□□□□□ -1.64
ITGB1-219ENST00000534049 GPS2Q13227 327 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 EZH2Q15910 746 aaKnown RBP4.78□□□□□ -1.64
ITGB1-219ENST00000534049 MGAT5BQ3V5L5 792 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 SLC44A4Q53GD3 710 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 TEX35Q5T0J7 233 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 AP1ARQ63HQ0 302 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 LMBRD2Q68DH5 695 aaPredicted RBP4.78□□□□□ -1.64
ITGB1-219ENST00000534049 ZNF783Q6ZMS7 281 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 KRT222Q8N1A0 295 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 AGAP3Q96P47 875 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 SH3GL3Q99963 347 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 IQCGQ9H095 443 aaKnown RBP4.78□□□□□ -1.64
ITGB1-219ENST00000534049 VEZTQ9HBM0 779 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 ZSCAN32Q9NX65 697 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 UTP6Q9NYH9 597 aaKnown RBP4.78□□□□□ -1.64
ITGB1-219ENST00000534049 XPR1Q9UBH6 696 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 DKK3Q9UBP4 350 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 SUN2Q9UH99 717 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 ADAM21Q9UKJ8 722 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 POLR2AP24928 1970 aaKnown RBP4.78□□□□□ -1.64
ITGB1-219ENST00000534049 DIP2AQ14689 1571 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 XRN1Q8IZH2 1706 aaKnown RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 AOX1Q06278 1338 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 A0A1W2PPL8 197 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 MANSC4A6NHS7 340 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 PES1O00541 588 aaKnown RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 DCLK1O15075 740 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 HTATSF1O43719 755 aaKnown RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 IL6RP08887 468 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 FAM200BP0CF97 657 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 CERS1P27544 350 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 HSPA1LP34931 641 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 PDE6CP51160 858 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 NAP1L1P55209 391 aaKnown RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 EEFSECP57772 596 aaKnown RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 LILRA4P59901 499 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 ICA1Q05084 483 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 GRM1Q13255 1194 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 BOP1Q14137 746 aaKnown RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 TBC1D25Q3MII6 688 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 TTC31Q49AM3 519 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 ARHGAP40Q5TG30 622 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 RGS7BPQ6MZT1 257 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 CXorf57Q6NSI4 855 aaKnown RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 EFCAB13Q8IY85 973 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 FANCBQ8NB91 859 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 ACRBPQ8NEB7 543 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 OR6B3Q8NGW1 331 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 SLC35G2Q8TBE7 412 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 SMG7Q92540 1137 aaKnown RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 MRGPRX1Q96LB2 322 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 POLR3CQ9BUI4 534 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 SERHLQ9NQF3 203 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 RRP7BPQ9NSQ0 103 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 TRMT13Q9NUP7 481 aaKnown RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 CHMP5Q9NZZ3 219 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 CPA4Q9UI42 421 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 SERTAD3Q9UJW9 196 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 NUDCQ9Y266 331 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 V9GYY5 206 aaPredicted RBP4.77□□□□□ -1.65
ITGB1-219ENST00000534049 ADAMTS13Q76LX8 1427 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 TMEM94Q12767 1356 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 TRPM2O94759 1503 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 ROBO1Q9Y6N7 1651 aa4.77□□□□□ -1.65
ITGB1-219ENST00000534049 COL16A1Q07092 1604 aaPredicted RBP4.76□□□□□ -1.65
ITGB1-219ENST00000534049 WIPF3A6NGB9 483 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 PHGDHO43175 533 aaKnown RBP4.76□□□□□ -1.65
ITGB1-219ENST00000534049 EPB41L2O43491 1005 aaKnown RBP4.76□□□□□ -1.65
ITGB1-219ENST00000534049 KIF5CO60282 957 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 UBXN7O94888 489 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 TJP3O95049 919 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 PRKCBP05771 671 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 TPM1P09493 284 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 NPSP0C0P6 89 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 RDXP35241 583 aaKnown RBP4.76□□□□□ -1.65
ITGB1-219ENST00000534049 COPB2P35606 906 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 SLC11A2P49281 568 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 RAB27AP51159 221 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 ATXN1P54253 815 aaKnown RBP4.76□□□□□ -1.65
ITGB1-219ENST00000534049 TPTEP56180 551 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 NEXNQ0ZGT2 675 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 DDX10Q13206 875 aaKnown RBP4.76□□□□□ -1.65
ITGB1-219ENST00000534049 ZNF267Q14586 743 aaPredicted RBP4.76□□□□□ -1.65
ITGB1-219ENST00000534049 MAP9Q49MG5 647 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 ANO6Q4KMQ2 910 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 TREML2Q5T2D2 321 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 PARS2Q7L3T8 475 aaKnown RBP4.76□□□□□ -1.65
ITGB1-219ENST00000534049 MAVSQ7Z434 540 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 GAS2L3Q86XJ1 694 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 SLC15A3Q8IY34 581 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 LRRC71Q8N4P6 559 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.76□□□□□ -1.65
ITGB1-219ENST00000534049 SAMD3Q8N6K7 520 aa4.76□□□□□ -1.65
ITGB1-219ENST00000534049 PNISRQ8TF01 805 aaKnown RBP4.76□□□□□ -1.65
ITGB1-219ENST00000534049 ATG4AQ8WYN0 398 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms