RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 KAZNQ674X7 775 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 CCDC62Q6P9F0 684 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 ZNF449Q6P9G9 518 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 UNC5AQ6ZN44 842 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 SLC26A11Q86WA9 606 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 PDSS2Q86YH6 399 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 FAM71DQ8N9W8 422 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 CDHR1Q96JP9 859 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 TRAPPC9Q96Q05 1148 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 NR1H4Q96RI1 486 aaPredicted RBP4.6□□□□□ -1.67
CTSC-208ENST00000533897 CYTH2Q99418 400 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 TUBB6Q9BUF5 446 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 CCDC28BQ9BUN5 200 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 MECRQ9BV79 373 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 SLC4A5Q9BY07 1137 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 PDGFDQ9GZP0 370 aaPredicted RBP4.6□□□□□ -1.67
CTSC-208ENST00000533897 EPB41L1Q9H4G0 881 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 ZNF302Q9NR11 478 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 ZNF277Q9NRM2 450 aaPredicted RBP4.6□□□□□ -1.67
CTSC-208ENST00000533897 HESX1Q9UBX0 185 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 USP18Q9UMW8 372 aa4.6□□□□□ -1.67
CTSC-208ENST00000533897 GOLGA8SH3BPF8 625 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 GOLGA8MH3BSY2 632 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 METTL18O95568 372 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 SERPINA6P08185 405 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 SMIM18P0DKX4 95 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 TNNI1P19237 187 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 PDE1BQ01064 536 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 BST1Q10588 318 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 PCLAFQ15004 111 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 RCN1Q15293 331 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 CA9Q16790 459 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 PABPC1LQ4VXU2 614 aaKnown RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 TTC39BQ5VTQ0 682 aaPredicted RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 LCLAT1Q6UWP7 414 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 MARK2Q7KZI7 788 aaKnown RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 PYROXD1Q8WU10 500 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 NT5C3BQ969T7 300 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 HAUS1Q96CS2 278 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 LRRC39Q96DD0 335 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 FAM111AQ96PZ2 611 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 GPR20Q99678 358 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 TRIM56Q9BRZ2 755 aaKnown RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 FRMD8Q9BZ67 464 aaPredicted RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 RBM38Q9H0Z9 239 aaKnown RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 CXCL16Q9H2A7 254 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 METTL5Q9NRN9 209 aaKnown RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 HOMER2Q9NSB8 354 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 FRMPD3Q5JV73 1810 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 SF3B1O75533 1304 aaKnown RBP eCLIP4.59□□□□□ -1.67
CTSC-208ENST00000533897 CHD5Q8TDI0 1954 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 LRRD1A4D1F6 860 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 KLHL33A6NCF5 533 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 SGK1O00141 431 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 CYB561D2O14569 222 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 NVLO15381 856 aaKnown RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 TOP3BO95985 862 aaKnown RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 HMGCRP04035 888 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 SBK3P0C264 359 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 MYL2P10916 166 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 KRT3P12035 628 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 ATF7P17544 494 aaPredicted RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 TGM2P21980 687 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 GCLCP48506 637 aaPredicted RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 HARS2P49590 506 aaKnown RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 RASSF2P50749 326 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 HDAC4P56524 1084 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 ZNF200P98182 395 aaPredicted RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 LAMTOR4Q0VGL1 99 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 NAA25Q14CX7 972 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 SETDB1Q15047 1291 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 ZBTB6Q15916 424 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 DPYSL2Q16555 572 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 MTERF2Q49AM1 385 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 TRMT10BQ6PF06 316 aaKnown RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 TMEM110Q86TL2 294 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 ULK2Q8IYT8 1036 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 CPXCR1Q8N123 301 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 PRPF31Q8WWY3 499 aaKnown RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 SIKE1Q9BRV8 207 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 STN1Q9H668 368 aaKnown RBP4.59□□□□□ -1.67
CTSC-208ENST00000533897 SMYD3Q9H7B4 428 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 RSAD1Q9HA92 442 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 ETNK2Q9NVF9 386 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 PPM1HQ9ULR3 514 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 SORCS3Q9UPU3 1222 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 USTQ9Y2C2 406 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 KIAA1671Q9BY89 1806 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 KAT6AQ92794 2004 aa4.59□□□□□ -1.67
CTSC-208ENST00000533897 K7ERI5 159 aa4.59□□□□□ -1.68
CTSC-208ENST00000533897 NFKBIEO00221 500 aa4.59□□□□□ -1.68
CTSC-208ENST00000533897 ITM2AO43736 263 aa4.59□□□□□ -1.68
CTSC-208ENST00000533897 LPXNO60711 386 aa4.59□□□□□ -1.68
CTSC-208ENST00000533897 RNASEH1O60930 286 aaKnown RBP4.59□□□□□ -1.68
CTSC-208ENST00000533897 HAUS5O94927 633 aa4.59□□□□□ -1.68
CTSC-208ENST00000533897 ANPEPP15144 967 aa4.59□□□□□ -1.68
CTSC-208ENST00000533897 TFE3P19532 575 aaPredicted RBP4.59□□□□□ -1.68
CTSC-208ENST00000533897 PHBP35232 272 aa4.59□□□□□ -1.68
CTSC-208ENST00000533897 RAP1GAPP47736 663 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms