RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 TRIM24O15164 1050 aa24.14■■□□□ 1.45
PKP3-210ENST00000533249 TBX18O95935 607 aa24.14■■□□□ 1.45
PKP3-210ENST00000533249 ASS1P00966 412 aaKnown RBP24.14■■□□□ 1.45
PKP3-210ENST00000533249 HLA-DRAP01903 254 aa24.14■■□□□ 1.45
PKP3-210ENST00000533249 FAM200BP0CF97 657 aa24.14■■□□□ 1.45
PKP3-210ENST00000533249 PFKFB1P16118 471 aa24.14■■□□□ 1.45
PKP3-210ENST00000533249 WASP42768 502 aa24.14■■□□□ 1.45
PKP3-210ENST00000533249 PTGER3P43115 390 aa24.14■■□□□ 1.45
PKP3-210ENST00000533249 ASPAP45381 313 aa24.14■■□□□ 1.45
PKP3-210ENST00000533249 PREPLQ4J6C6 727 aaPredicted RBP24.14■■□□□ 1.45
PKP3-210ENST00000533249 GPRIN1Q7Z2K8 1008 aa24.14■■□□□ 1.45
PKP3-210ENST00000533249 UNC93AQ86WB7 457 aa24.14■■□□□ 1.45
PKP3-210ENST00000533249 TERB1Q8NA31 727 aa24.14■■□□□ 1.45
PKP3-210ENST00000533249 FRMD4BQ9Y2L6 1034 aa24.14■■□□□ 1.45
PKP3-210ENST00000533249 USP24Q9UPU5 2620 aa24.14■■□□□ 1.45
PKP3-210ENST00000533249 CDX4O14627 284 aaPredicted RBP24.13■■□□□ 1.45
PKP3-210ENST00000533249 BYSLQ13895 437 aaKnown RBP24.13■■□□□ 1.45
PKP3-210ENST00000533249 MAP7D1Q3KQU3 841 aa24.13■■□□□ 1.45
PKP3-210ENST00000533249 UAP1L1Q3KQV9 507 aa24.13■■□□□ 1.45
PKP3-210ENST00000533249 TRIM61Q5EBN2 209 aa24.13■■□□□ 1.45
PKP3-210ENST00000533249 C1orf220Q5T0J3 134 aa24.13■■□□□ 1.45
PKP3-210ENST00000533249 SH3PXD2AQ5TCZ1 1133 aa24.13■■□□□ 1.45
PKP3-210ENST00000533249 NUDT18Q6ZVK8 323 aa24.13■■□□□ 1.45
PKP3-210ENST00000533249 TRMT11Q7Z4G4 463 aaKnown RBP24.13■■□□□ 1.45
PKP3-210ENST00000533249 TMEM174Q8WUU8 243 aa24.13■■□□□ 1.45
PKP3-210ENST00000533249 DUSP9Q99956 384 aaKnown RBP24.13■■□□□ 1.45
PKP3-210ENST00000533249 KLF16Q9BXK1 252 aaPredicted RBP24.13■■□□□ 1.45
PKP3-210ENST00000533249 DNAJC17Q9NVM6 304 aaKnown RBP24.13■■□□□ 1.45
PKP3-210ENST00000533249 ATXN2Q99700 1313 aaKnown RBP24.12■■□□□ 1.45
PKP3-210ENST00000533249 NEDD8-MDP1E9PL57 170 aa24.12■■□□□ 1.45
PKP3-210ENST00000533249 IKBKBO14920 756 aa24.12■■□□□ 1.45
PKP3-210ENST00000533249 TRIM21P19474 475 aaKnown RBP24.12■■□□□ 1.45
PKP3-210ENST00000533249 ZNF252P-AS1Q0IIN9 211 aa24.12■■□□□ 1.45
PKP3-210ENST00000533249 GRAMD4Q6IC98 578 aa24.12■■□□□ 1.45
PKP3-210ENST00000533249 HTR3DQ70Z44 454 aa24.12■■□□□ 1.45
PKP3-210ENST00000533249 TWNKQ96RR1 684 aa24.12■■□□□ 1.45
PKP3-210ENST00000533249 TMEM74BQ9NUR3 256 aa24.12■■□□□ 1.45
PKP3-210ENST00000533249 OSER1Q9NX31 292 aa24.12■■□□□ 1.45
PKP3-210ENST00000533249 GON4LQ3T8J9 2241 aa24.12■■□□□ 1.45
PKP3-210ENST00000533249 TNRC6BQ9UPQ9 1833 aaKnown RBP24.12■■□□□ 1.45
PKP3-210ENST00000533249 PLXND1Q9Y4D7 1925 aa24.12■■□□□ 1.45
PKP3-210ENST00000533249 CYP26A1O43174 497 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 CALUO43852 315 aaPredicted RBP24.11■■□□□ 1.45
PKP3-210ENST00000533249 HOXB2P14652 356 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 ACO1P21399 889 aaKnown RBP24.11■■□□□ 1.45
PKP3-210ENST00000533249 ATP5C1P36542 298 aaKnown RBP24.11■■□□□ 1.45
PKP3-210ENST00000533249 VAMP7P51809 220 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 LYSMD4Q5XG99 296 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 TPGS1Q6ZTW0 290 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 CLEC20AQ6ZU45 233 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 MIB1Q86YT6 1006 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 SYT12Q8IV01 421 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 KCNV2Q8TDN2 545 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 ERLEC1Q96DZ1 483 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 BBS2Q9BXC9 721 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 NUSAP1Q9BXS6 441 aaKnown RBP24.11■■□□□ 1.45
PKP3-210ENST00000533249 IMPG2Q9BZV3 1241 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 EVLQ9UI08 416 aaPredicted RBP24.11■■□□□ 1.45
PKP3-210ENST00000533249 LSM7Q9UK45 103 aaKnown RBP24.11■■□□□ 1.45
PKP3-210ENST00000533249 NUDT5Q9UKK9 219 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 HCN2Q9UL51 889 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 SCML2Q9UQR0 700 aa24.11■■□□□ 1.45
PKP3-210ENST00000533249 MDM4O15151 490 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 GREM1O60565 184 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 TRIM49P0CI25 452 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 TRIM49CP0CI26 452 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 GABRG2P18507 467 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 CMA1P23946 247 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 NTSR1P30989 418 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 MAPK8P45983 427 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 GOLGA8FQ08AF8 430 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 GOLGA8DPQ0D2H9 430 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 FOXC1Q12948 553 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 EGFLAMQ63HQ2 1017 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 DEFB119Q8N690 84 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 CYFIP2Q96F07 1278 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 XPO6Q96QU8 1125 aaKnown RBP24.1■■□□□ 1.45
PKP3-210ENST00000533249 HNRNPABQ99729 332 aaKnown RBP24.1■■□□□ 1.45
PKP3-210ENST00000533249 MMRN2Q9H8L6 949 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 NMUR1Q9HB89 426 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 CYLDQ9NQC7 956 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 USP25Q9UHP3 1055 aa24.1■■□□□ 1.45
PKP3-210ENST00000533249 CEP295Q9C0D2 2601 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 A0A1W2PQH9 124 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 HHLA1C9JL84 531 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 TYRP14679 529 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 CD58P19256 250 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 GCLMP48507 274 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 INCA1Q0VD86 236 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 LMAN2Q12907 356 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 TAS1R2Q8TE23 839 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 ACOX2Q99424 681 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 NT5C1AQ9BXI3 368 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 APOBEC3GQ9HC16 384 aaKnown RBP24.09■■□□□ 1.45
PKP3-210ENST00000533249 CALCOCO1Q9P1Z2 691 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 MAPK8IP1Q9UQF2 711 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 TRAF3IP3Q9Y228 551 aa24.09■■□□□ 1.45
PKP3-210ENST00000533249 CACNG3O60359 315 aa24.08■■□□□ 1.45
PKP3-210ENST00000533249 KIF20AO95235 890 aa24.08■■□□□ 1.45
PKP3-210ENST00000533249 MYL1P05976 194 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms