RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 GREM1O60565 184 aa31.84■■■□□ 2.69
SSSCA1-207ENST00000533115 ADH5P11766 374 aa31.84■■■□□ 2.69
SSSCA1-207ENST00000533115 DMWDQ09019 674 aa31.84■■■□□ 2.69
SSSCA1-207ENST00000533115 LY6G5CQ5SRR4 150 aa31.84■■■□□ 2.69
SSSCA1-207ENST00000533115 LCLAT1Q6UWP7 414 aa31.84■■■□□ 2.69
SSSCA1-207ENST00000533115 ARHGAP18Q8N392 663 aa31.84■■■□□ 2.69
SSSCA1-207ENST00000533115 UBA3Q8TBC4 463 aa31.84■■■□□ 2.69
SSSCA1-207ENST00000533115 TFAP2BQ92481 460 aa31.84■■■□□ 2.69
SSSCA1-207ENST00000533115 EPC1Q9H2F5 836 aa31.84■■■□□ 2.69
SSSCA1-207ENST00000533115 ATG2BQ96BY7 2078 aa31.84■■■□□ 2.69
SSSCA1-207ENST00000533115 HOXA6P31267 233 aa31.83■■■□□ 2.69
SSSCA1-207ENST00000533115 EIF2DP41214 584 aaKnown RBP31.83■■■□□ 2.69
SSSCA1-207ENST00000533115 PLA2G4AP47712 749 aa31.83■■■□□ 2.69
SSSCA1-207ENST00000533115 FNTBP49356 437 aa31.83■■■□□ 2.69
SSSCA1-207ENST00000533115 PM20D1Q6GTS8 502 aa31.83■■■□□ 2.69
SSSCA1-207ENST00000533115 IRF2BP1Q8IU81 584 aa31.83■■■□□ 2.69
SSSCA1-207ENST00000533115 RBBP8NLQ8NC74 664 aaPredicted RBP31.83■■■□□ 2.69
SSSCA1-207ENST00000533115 RPLP0P6Q8NHW5 317 aa31.83■■■□□ 2.69
SSSCA1-207ENST00000533115 LSM7Q9UK45 103 aaKnown RBP31.83■■■□□ 2.69
SSSCA1-207ENST00000533115 ZBED1O96006 694 aa31.82■■■□□ 2.68
SSSCA1-207ENST00000533115 SETSIPP0DME0 302 aa31.82■■■□□ 2.68
SSSCA1-207ENST00000533115 SLC6A11P48066 632 aa31.82■■■□□ 2.68
SSSCA1-207ENST00000533115 GAD2Q05329 585 aa31.82■■■□□ 2.68
SSSCA1-207ENST00000533115 TPD52L1Q16890 204 aaPredicted RBP31.82■■■□□ 2.68
SSSCA1-207ENST00000533115 PKDCCQ504Y2 493 aa31.82■■■□□ 2.68
SSSCA1-207ENST00000533115 LONP2Q86WA8 852 aa31.82■■■□□ 2.68
SSSCA1-207ENST00000533115 CCDC26Q8TAB7 109 aa31.82■■■□□ 2.68
SSSCA1-207ENST00000533115 KREMEN1Q96MU8 473 aa31.82■■■□□ 2.68
SSSCA1-207ENST00000533115 LRRC4Q9HBW1 653 aa31.82■■■□□ 2.68
SSSCA1-207ENST00000533115 SPHK2Q9NRA0 654 aa31.82■■■□□ 2.68
SSSCA1-207ENST00000533115 SLC8A2Q9UPR5 921 aa31.82■■■□□ 2.68
SSSCA1-207ENST00000533115 MYOFQ9NZM1 2061 aa31.82■■■□□ 2.68
SSSCA1-207ENST00000533115 CFAP54Q96N23 3096 aa31.81■■■□□ 2.68
SSSCA1-207ENST00000533115 YWHAGP61981 247 aaKnown RBP eCLIP31.81■■■□□ 2.68
SSSCA1-207ENST00000533115 CNGA2Q16280 664 aa31.81■■■□□ 2.68
SSSCA1-207ENST00000533115 DPCR1Q3MIW9 517 aa31.81■■■□□ 2.68
SSSCA1-207ENST00000533115 HEATR6Q6AI08 1181 aaKnown RBP31.81■■■□□ 2.68
SSSCA1-207ENST00000533115 C12orf40Q86WS4 652 aa31.81■■■□□ 2.68
SSSCA1-207ENST00000533115 PNKPQ96T60 521 aa31.81■■■□□ 2.68
SSSCA1-207ENST00000533115 ZSWIM1Q9BR11 485 aa31.81■■■□□ 2.68
SSSCA1-207ENST00000533115 ULBP1Q9BZM6 244 aa31.81■■■□□ 2.68
SSSCA1-207ENST00000533115 WDR3Q9UNX4 943 aaKnown RBP eCLIP31.81■■■□□ 2.68
SSSCA1-207ENST00000533115 EP300Q09472 2414 aaPredicted RBP31.81■■■□□ 2.68
SSSCA1-207ENST00000533115 GVINP1Q7Z2Y8 2422 aa31.8■■■□□ 2.68
SSSCA1-207ENST00000533115 K7EQS6 105 aa31.8■■■□□ 2.68
SSSCA1-207ENST00000533115 HOXC13P31276 330 aa31.8■■■□□ 2.68
SSSCA1-207ENST00000533115 ZNF132P52740 706 aa31.8■■■□□ 2.68
SSSCA1-207ENST00000533115 STILQ15468 1287 aa31.8■■■□□ 2.68
SSSCA1-207ENST00000533115 MIB1Q86YT6 1006 aa31.8■■■□□ 2.68
SSSCA1-207ENST00000533115 KCTD13Q8WZ19 329 aa31.8■■■□□ 2.68
SSSCA1-207ENST00000533115 RUBCNQ92622 972 aa31.8■■■□□ 2.68
SSSCA1-207ENST00000533115 GBP4Q96PP9 640 aa31.8■■■□□ 2.68
SSSCA1-207ENST00000533115 UBE2TQ9NPD8 197 aaPredicted RBP31.8■■■□□ 2.68
SSSCA1-207ENST00000533115 DACH1Q9UI36 760 aa31.8■■■□□ 2.68
SSSCA1-207ENST00000533115 SMG5Q9UPR3 1016 aaKnown RBP31.8■■■□□ 2.68
SSSCA1-207ENST00000533115 HOXC11O43248 304 aaPredicted RBP31.79■■■□□ 2.68
SSSCA1-207ENST00000533115 BRD2P25440 801 aaKnown RBP31.79■■■□□ 2.68
SSSCA1-207ENST00000533115 ADIGQ0VDE8 80 aa31.79■■■□□ 2.68
SSSCA1-207ENST00000533115 OTOGLQ3ZCN5 2332 aa31.79■■■□□ 2.68
SSSCA1-207ENST00000533115 TMEM25Q86YD3 366 aa31.79■■■□□ 2.68
SSSCA1-207ENST00000533115 ACDQ96AP0 544 aa31.79■■■□□ 2.68
SSSCA1-207ENST00000533115 CRACR2AQ9BSW2 395 aa31.79■■■□□ 2.68
SSSCA1-207ENST00000533115 THAP9Q9H5L6 903 aa31.79■■■□□ 2.68
SSSCA1-207ENST00000533115 POLR3BQ9NW08 1133 aaPredicted RBP31.79■■■□□ 2.68
SSSCA1-207ENST00000533115 RASAL2Q9UJF2 1139 aa31.79■■■□□ 2.68
SSSCA1-207ENST00000533115 CNTN6Q9UQ52 1028 aa31.79■■■□□ 2.68
SSSCA1-207ENST00000533115 ZNF292O60281 2723 aa31.79■■■□□ 2.68
SSSCA1-207ENST00000533115 GPR179Q6PRD1 2367 aa31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 KIAA1549LQ6ZVL6 1849 aa31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 FRYLO94915 3013 aa31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 PALM2-AKAP2B1ALY0 433 aaPredicted RBP31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 CALCAP01258 141 aa31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 ERCC5P28715 1186 aaPredicted RBP31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 MTIF2P46199 727 aaKnown RBP31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 EFEMP1Q12805 493 aa31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 ANO4Q32M45 955 aa31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 BTBD8Q5XKL5 378 aa31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 SYT13Q7L8C5 426 aa31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 BHLHA9Q7RTU4 235 aa31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 WDR5BQ86VZ2 330 aa31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 NDRG1Q92597 394 aaKnown RBP31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 IPO9Q96P70 1041 aaKnown RBP31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 HINFPQ9BQA5 517 aa31.78■■■□□ 2.68
SSSCA1-207ENST00000533115 M0QYV0 167 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 STC2O76061 302 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 KAT7O95251 611 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 APODP05090 189 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 CNR2P34972 360 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 SEC13P55735 322 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 COG7P83436 770 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 MESP2Q0VG99 397 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 TRIM65Q6PJ69 517 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 GBP6Q6ZN66 633 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 Q6ZNB5 142 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 RSRC2Q7L4I2 434 aaKnown RBP31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 SIX6OS1Q8N1H7 587 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 USP33Q8TEY7 942 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 SLC35F5Q8WV83 523 aa31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 SECISBP2LQ93073 1101 aaKnown RBP31.77■■■□□ 2.68
SSSCA1-207ENST00000533115 ARHGEF4Q9NR80 690 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms