RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 RIOX2Q8IUF8 465 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ZBED8Q8IZ13 594 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 TNIP2Q8NFZ5 429 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 SCFD1Q8WVM8 642 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 PHF12Q96QT6 1004 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 TMEM109Q9BVC6 243 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 XPNPEP3Q9NQH7 507 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 STMN3Q9NZ72 180 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 HACD3Q9P035 362 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 MOSPD1Q9UJG1 213 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ACTL7BQ9Y614 415 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 PFASO15067 1338 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 A0A087X0B3 334 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 AP3B1O00203 1094 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 KIAA0391O15091 583 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 LRRN2O75325 713 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 GH1P01241 217 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 VTNP04004 478 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 FDX1P10109 184 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 CPA3P15088 417 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 QARSP47897 775 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 PTK2BQ14289 1009 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 PDK4Q16654 411 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 FAM110CQ1W6H9 321 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 KIZQ2M2Z5 673 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 NADK2Q4G0N4 442 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 RINT1Q6NUQ1 792 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ASRGL1Q7L266 308 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 PDIK1LQ8N165 341 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 POU5F2Q8N7G0 328 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 TRPC4APQ8TEL6 797 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 RSAD2Q8WXG1 361 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 SEPT1Q8WYJ6 367 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 GATA6Q92908 595 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 OXNAD1Q96HP4 312 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 NAP1L4Q99733 375 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 CCSER1Q9C0I3 900 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ING2Q9H160 280 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 OCEL1Q9H607 264 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 PRM3Q9NNZ6 103 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ARL8BQ9NVJ2 186 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 WHRNQ9P202 907 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 SCN9AQ15858 1988 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 SCN7AQ01118 1682 aa7.02□□□□□ -1.28
TGFBR3-209ENST00000532540 PAPPAQ13219 1627 aa7.02□□□□□ -1.28
TGFBR3-209ENST00000532540 TAF1LQ8IZX4 1826 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 CCDC195A0A1B0GUA6 201 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 SH3PXD2BA1X283 911 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 KLHL41O60662 606 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 CLASP2O75122 1294 aaKnown RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 OR6B1O95007 311 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 ZBED1O96006 694 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 STX1BP61266 288 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 GPC5P78333 572 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 PRKCEQ02156 737 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 RELAQ04206 551 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 TLK2Q86UE8 772 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 TREML1Q86YW5 311 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 ERI1Q8IV48 349 aaKnown RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 TAB3Q8N5C8 712 aaPredicted RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 RNF149Q8NC42 400 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 FLCNQ8NFG4 579 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 NPLOC4Q8TAT6 608 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 PLEKHO2Q8TD55 490 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 DIS3LQ8TF46 1054 aaKnown RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 SNX27Q96L92 541 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 GLT1D1Q96MS3 346 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 HAPLN3Q96S86 360 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 GPAMQ9HCL2 828 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 RAB20Q9NX57 234 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 PKD2L2Q9NZM6 624 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 TTC7AQ9ULT0 858 aaPredicted RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 SSX2IPQ9Y2D8 614 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 ALG6Q9Y672 507 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 SDK1Q7Z5N4 2213 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 A0A087WXM4 84 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 LOC100653049A0A140TA62 436 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 SOWAHBA6NEL2 793 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 hCG_1984214I3L0E3 225 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 MED24O75448 989 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 KRT34O76011 436 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 BAIAP3O94812 1187 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 SLC10A3P09131 477 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 NMT1P30419 496 aaKnown RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 GRK4P32298 578 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 PDIA2Q13087 525 aaKnown RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 MAP2K5Q13163 448 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 FLOT2Q14254 428 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 PABPC1LQ4VXU2 614 aaKnown RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 ZC2HC1CQ53FD0 456 aaPredicted RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 ZNF394Q53GI3 561 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 LPCAT4Q643R3 524 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 TTC27Q6P3X3 843 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 TUBA3EQ6PEY2 450 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 ZNF713Q8N859 430 aaPredicted RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 MS4A4AQ96JQ5 239 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 BTBD9Q96Q07 612 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 KLF6Q99612 283 aaPredicted RBP7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 MARCH7Q9H992 704 aa7.02□□□□□ -1.29
TGFBR3-209ENST00000532540 HMX1Q9NP08 348 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms