RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ZNF707Q96C28 371 aaPredicted RBP13.14□□□□□ -0.31
COPB1-208ENST00000532088 SLITRK1Q96PX8 696 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 LRRC3Q9BY71 257 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 IGFLR1Q9H665 355 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 ST7Q9NRC1 585 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 ADAM22Q9P0K1 906 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 ZMYM5Q9UJ78 669 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 MYO9BQ13459 2157 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 CDH23Q9H251 3354 aa13.14□□□□□ -0.31
COPB1-208ENST00000532088 CLUHO75153 1309 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 GREB1Q4ZG55 1949 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 MYO7AQ13402 2215 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 TRANK1O15050 2925 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 MYH10P35580 1976 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 RFPL2O75678 378 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 FTLP02792 175 aaPredicted RBP13.13□□□□□ -0.31
COPB1-208ENST00000532088 ERBB2P04626 1255 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 ZDHHC11BP0C7U3 371 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 PTPN2P17706 415 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 CDC25CP30307 473 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 ABL2P42684 1182 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 RGS7P49802 495 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 DAOAP59103 153 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 KRT83P78385 493 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 ADIGQ0VDE8 80 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 TAF12Q16514 161 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 EFHC1Q5JVL4 640 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 SYCE2Q6PIF2 218 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 RAD9BQ6WBX8 426 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 SLC26A9Q7LBE3 791 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 GPR149Q86SP6 731 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 MON1AQ86VX9 555 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 XYLT1Q86Y38 959 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 TMC8Q8IU68 726 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 MICALL1Q8N3F8 863 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 GIPC2Q8TF65 315 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 MCRS1Q96EZ8 462 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 MSLNLQ96KJ4 702 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 ULBP1Q9BZM6 244 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 ADAM7Q9H2U9 754 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 SYNCQ9H7C4 482 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 ASAH2Q9NR71 780 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 TMEM51Q9NW97 253 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 TAS2R14Q9NYV8 317 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 CLEC1BQ9P126 229 aa13.13□□□□□ -0.31
COPB1-208ENST00000532088 PRRC2BQ5JSZ5 2229 aaKnown RBP13.12□□□□□ -0.31
COPB1-208ENST00000532088 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.12□□□□□ -0.31
COPB1-208ENST00000532088 TCRBV5S1A1TA0A578 114 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 ZNF197O14709 1029 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 CCL16O15467 120 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 LINC01565O15544 149 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 PAPSS1O43252 624 aaPredicted RBP13.12□□□□□ -0.31
COPB1-208ENST00000532088 TBX10O75333 385 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 F11P03951 625 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 H2AFZP0C0S5 128 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 TMEM253P0C7T8 217 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 TUBP50607 506 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 SLC6A3Q01959 620 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 TCEAL1Q15170 157 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 SDHAF4Q5VUM1 108 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 PLEKHA7Q6IQ23 1121 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 OLFML1Q6UWY5 402 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 MMS22LQ6ZRQ5 1243 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 H2AFVQ71UI9 128 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 BHLHA9Q7RTU4 235 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 C3orf20Q8ND61 904 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 SCAMP5Q8TAC9 235 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 SMG7Q92540 1137 aaKnown RBP13.12□□□□□ -0.31
COPB1-208ENST00000532088 FBXO32Q969P5 355 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 CALR3Q96L12 384 aaKnown RBP13.12□□□□□ -0.31
COPB1-208ENST00000532088 CDK5RAP1Q96SZ6 601 aaKnown RBP13.12□□□□□ -0.31
COPB1-208ENST00000532088 C11orf70Q9BRQ4 267 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 S1PR5Q9H228 398 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 TLR8Q9NR97 1041 aaKnown RBP13.12□□□□□ -0.31
COPB1-208ENST00000532088 SPTLC3Q9NUV7 552 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 CLDND1Q9NY35 253 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 CLIC5Q9NZA1 410 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 SCINQ9Y6U3 715 aa13.12□□□□□ -0.31
COPB1-208ENST00000532088 ZNF263O14978 683 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 HSF2BPO75031 334 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 RHOP08100 348 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 USP17L7P0C7H9 530 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 LCP1P13796 627 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 DDX6P26196 483 aaKnown RBP eCLIP13.11□□□□□ -0.313e-14■□□□□ 8.9
COPB1-208ENST00000532088 LTBRP36941 435 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 CDR1P51861 262 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 GALCP54803 685 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 GPC5P78333 572 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 RBM10P98175 930 aaKnown RBP13.11□□□□□ -0.31
COPB1-208ENST00000532088 TAF10Q12962 218 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 MTMR3Q13615 1198 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 HS1BP3Q53T59 392 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 CYP4A22Q5TCH4 519 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 OR6B2Q6IFH4 312 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 CES5AQ6NT32 575 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 KLHDC10Q6PID8 442 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 ZNF662Q6ZS27 426 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 FAM183BPQ6ZVS7 135 aa13.11□□□□□ -0.31
COPB1-208ENST00000532088 PDZD4Q76G19 769 aaPredicted RBP13.11□□□□□ -0.31
COPB1-208ENST00000532088 BPHLQ86WA6 291 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms