RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 STXBP4Q6ZWJ1 553 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 CCDC65Q8IXS2 484 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 PHTF2Q8N3S3 785 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 ZCCHC9Q8N567 271 aaKnown RBP9.79□□□□□ -0.84
NEDD8-206ENST00000531430 PDILTQ8N807 584 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 ADAMTS14Q8WXS8 1223 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 FOXJ1Q92949 421 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 JAKMIP2Q96AA8 810 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 ELMO3Q96BJ8 720 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 TOE1Q96GM8 510 aaKnown RBP9.79□□□□□ -0.84
NEDD8-206ENST00000531430 ZNF419Q96HQ0 510 aaPredicted RBP9.79□□□□□ -0.84
NEDD8-206ENST00000531430 GAREM1Q9H706 876 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 TMEM30AQ9NV96 361 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 PLK2Q9NYY3 685 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 HSPBP1Q9NZL4 362 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 GMIPQ9P107 970 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 WDR35Q9P2L0 1181 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 HCN2Q9UL51 889 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 ATP8B3O60423 1300 aa9.79□□□□□ -0.84
NEDD8-206ENST00000531430 A0A1B0GTW7 788 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 HOXC11O43248 304 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-206ENST00000531430 TACC1O75410 805 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 AP1G2O75843 785 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 NCAM1P13591 858 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 CD6P30203 668 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 DGKGP49619 791 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 SLC5A3P53794 718 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 MYL6P60660 151 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 CYP4F3Q08477 520 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 BIRC3Q13489 604 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 STARD3Q14849 445 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 SCARA5Q6ZMJ2 495 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 CCDC73Q6ZRK6 1079 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 LIMS2Q7Z4I7 341 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 BRAPQ7Z569 592 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 FAM124AQ86V42 546 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 CACUL1Q86Y37 369 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 WDR49Q8IV35 697 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 NELFCDQ8IXH7 590 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 ETFBKMTQ8IXQ9 262 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 KIAA1958Q8N8K9 716 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 B3GALNT2Q8NCR0 500 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 GLIS3Q8NEA6 775 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 SNX19Q92543 992 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 MRGPRX1Q96LB2 322 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 IL21RQ9HBE5 538 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 KIAA1586Q9HCI6 787 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 OLFML3Q9NRN5 406 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 LSM7Q9UK45 103 aaKnown RBP9.78□□□□□ -0.84
NEDD8-206ENST00000531430 NUDT5Q9UKK9 219 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 STARD13Q9Y3M8 1113 aa9.78□□□□□ -0.84
NEDD8-206ENST00000531430 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.78□□□□□ -0.84
NEDD8-206ENST00000531430 URB1O60287 2271 aaKnown RBP9.78□□□□□ -0.84
NEDD8-206ENST00000531430 HELZP42694 1942 aaKnown RBP9.78□□□□□ -0.84
NEDD8-206ENST00000531430 GOLGA4Q13439 2230 aaKnown RBP9.78□□□□□ -0.84
NEDD8-206ENST00000531430 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 FAM149AA5PLN7 773 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 TRABD2BA6NFA1 517 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 KCNK3O14649 394 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 KIAA0391O15091 583 aaKnown RBP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 SYNCRIPO60506 623 aaKnown RBP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 TLR5O60602 858 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 KIF20AO95235 890 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 CAPNS1P04632 268 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 ATXN1LP0C7T5 689 aaKnown RBP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 CHRM1P11229 460 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 ACADMP11310 421 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 ATP5C1P36542 298 aaKnown RBP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 MATKP42679 507 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 MAP3K7CLP57077 242 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 GOLGA8FQ08AF8 430 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 GOLGA8DPQ0D2H9 430 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 ORC1Q13415 861 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 RABEP1Q15276 862 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 SNRNP35Q16560 246 aaKnown RBP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 DCAF12L1Q5VU92 463 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 FAM173BQ6P4H8 233 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 ACOT1Q86TX2 421 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 OVCA2Q8WZ82 227 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 COL26A1Q96A83 441 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 ZFRQ96KR1 1074 aaKnown RBP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 DCBLD2Q96PD2 775 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 TRIM9Q9C026 710 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 ZDHHC5Q9C0B5 715 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 DMAP1Q9NPF5 467 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 TM7SF3Q9NS93 570 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 FBXO2Q9UK22 296 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 SRPRBQ9Y5M8 271 aaKnown RBP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 STON1Q9Y6Q2 735 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 ITPR1Q14643 2758 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 TNRC6BQ9UPQ9 1833 aaKnown RBP9.77□□□□□ -0.85
NEDD8-206ENST00000531430 ACACAQ13085 2346 aa9.77□□□□□ -0.85
NEDD8-206ENST00000531430 WDFY3Q8IZQ1 3526 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 MDM4O15151 490 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 BCAT2O15382 392 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-206ENST00000531430 HMBSP08397 361 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 FAM163BP0C2L3 166 aa9.76□□□□□ -0.85
NEDD8-206ENST00000531430 ADORA2BP29275 332 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms