RNA–Protein interactions for RNA: ENST00000531206.5

CDC27-207, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-207ENST00000531206 KCNE4Q8WWG9 221 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 PAFAH2Q99487 392 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 C7orf25Q9BPX7 421 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 CACNG6Q9BXT2 260 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 GLIS2Q9BZE0 524 aaPredicted RBP3.39□□□□□ -1.87
CDC27-207ENST00000531206 NUCKS1Q9H1E3 243 aaKnown RBP3.39□□□□□ -1.87
CDC27-207ENST00000531206 PIDD1Q9HB75 910 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 TDP1Q9NUW8 608 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 PI4KBQ9UBF8 816 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 HERC5Q9UII4 1024 aaKnown RBP3.39□□□□□ -1.87
CDC27-207ENST00000531206 SH3BGRL2Q9UJC5 107 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 SLC6A14Q9UN76 642 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 RRP7AQ9Y3A4 280 aaKnown RBP3.39□□□□□ -1.87
CDC27-207ENST00000531206 NPC1L1Q9UHC9 1359 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 FAM237BA0A1B0GVD1 139 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 A0A1W2PRV1 198 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 ZNF561-AS1K7EIQ3 104 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 AGPSO00116 658 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 MASP2O00187 686 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 RPP40O75818 363 aaKnown RBP3.39□□□□□ -1.87
CDC27-207ENST00000531206 PRSS23O95084 383 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 BCL10O95999 233 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 MMP2P08253 660 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 RPS12P25398 132 aaKnown RBP3.39□□□□□ -1.87
CDC27-207ENST00000531206 IDUAP35475 653 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 PTPN9P43378 593 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 GCNT1Q02742 428 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 DCTN1Q14203 1278 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 WTAPQ15007 396 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 CRB2Q5IJ48 1285 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 TMEM240Q5SV17 173 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 MCTP1Q6DN14 999 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 MRPL14Q6P1L8 145 aaKnown RBP3.39□□□□□ -1.87
CDC27-207ENST00000531206 TAF2Q6P1X5 1199 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 PPP1R21Q6ZMI0 780 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 RGS9BPQ6ZS82 235 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.39□□□□□ -1.87
CDC27-207ENST00000531206 TBC1D21Q8IYX1 336 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 OR6P1Q8NGX9 317 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 DCAF4Q8WV16 495 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 HMGB4Q8WW32 186 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 KIAA1143Q96AT1 154 aaPredicted RBP3.39□□□□□ -1.87
CDC27-207ENST00000531206 ELP4Q96EB1 424 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 SNX22Q96L94 193 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 FER1L6-AS2Q96M78 137 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 MTMR12Q9C0I1 747 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 SLC7A5P2Q9GIP4 190 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 TMEM206Q9H813 350 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 MAGEE1Q9HCI5 957 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 PLSCR4Q9NRQ2 329 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 AATFQ9NY61 560 aaKnown RBP eCLIP3.39□□□□□ -1.87
CDC27-207ENST00000531206 SUCLA2Q9P2R7 463 aaPredicted RBP3.39□□□□□ -1.87
CDC27-207ENST00000531206 ITM2BQ9Y287 266 aa3.39□□□□□ -1.87
CDC27-207ENST00000531206 A0A1B0GUL6 1792 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 NPIPB15A6NHN6 443 aaPredicted RBP3.38□□□□□ -1.87
CDC27-207ENST00000531206 AGAP14A8MT82 685 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 PLA2G6O60733 806 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 RGS9O75916 674 aaPredicted RBP3.38□□□□□ -1.87
CDC27-207ENST00000531206 EGFRP00533 1210 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 F11P03951 625 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 TPM2P07951 284 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 CYP2C8P10632 490 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 CKBP12277 381 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 FOSL1P15407 271 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 RPL17P18621 184 aaKnown RBP3.38□□□□□ -1.87
CDC27-207ENST00000531206 ALAS2P22557 587 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 TMOD1P28289 359 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 HOXA10P31260 410 aaPredicted RBP3.38□□□□□ -1.87
CDC27-207ENST00000531206 RNASE9P60153 205 aaKnown RBP3.38□□□□□ -1.87
CDC27-207ENST00000531206 BEX3Q00994 111 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 SRSF11Q05519 484 aaKnown RBP3.38□□□□□ -1.87
CDC27-207ENST00000531206 PKN1Q16512 942 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 AOC3Q16853 763 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 LONRF2Q1L5Z9 754 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 MUM1Q2TAK8 710 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 CRY2Q49AN0 593 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 HECTD3Q5T447 861 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 RINT1Q6NUQ1 792 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 TUSC5Q8IXB3 177 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 SMYD4Q8IYR2 804 aaPredicted RBP3.38□□□□□ -1.87
CDC27-207ENST00000531206 SYCP3Q8IZU3 236 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 DDX54Q8TDD1 881 aaKnown RBP3.38□□□□□ -1.87
CDC27-207ENST00000531206 PABPC5Q96DU9 382 aaKnown RBP3.38□□□□□ -1.87
CDC27-207ENST00000531206 CABS1Q96KC9 395 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 SMC6Q96SB8 1091 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 SOX17Q9H6I2 414 aaPredicted RBP3.38□□□□□ -1.87
CDC27-207ENST00000531206 ZNF277Q9NRM2 450 aaPredicted RBP3.38□□□□□ -1.87
CDC27-207ENST00000531206 CHST7Q9NS84 486 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 ZDHHC3Q9NYG2 299 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 UBAP1Q9NZ09 502 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 ZNF624Q9P2J8 865 aaPredicted RBP3.38□□□□□ -1.87
CDC27-207ENST00000531206 THEGQ9P2T0 379 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 TCFL5Q9UL49 500 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 SMC3Q9UQE7 1217 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 PCDHA10Q9Y5I2 948 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 RLFQ13129 1914 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 ACOT7O00154 380 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 TBC1D4O60343 1298 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 DNAJB6O75190 326 aa3.38□□□□□ -1.87
CDC27-207ENST00000531206 TAF5LO75529 589 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms