RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 KLHDC10Q6PID8 442 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 Q6ZS52 159 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 ARHGAP18Q8N392 663 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 ZNF276Q8N554 614 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 SLC4A11Q8NBS3 891 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 JAKMIP2Q96AA8 810 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 NT5C1BQ96P26 610 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 CCSER2Q9H7U1 834 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 FBRSL1Q9HCM7 1045 aaKnown RBP11.57□□□□□ -0.56
CAPN1-221ENST00000531068 CYLDQ9NQC7 956 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 IFNKQ9P0W0 207 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 HESX1Q9UBX0 185 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 RAB23Q9ULC3 237 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 SLC8A2Q9UPR5 921 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.57□□□□□ -0.56
CAPN1-221ENST00000531068 USP3Q9Y6I4 520 aa11.57□□□□□ -0.56
CAPN1-221ENST00000531068 CCDC163A0A0D9SF12 145 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-221ENST00000531068 KCNJ18B7U540 433 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 EGFP01133 1207 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 PAEPP09466 180 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 VDRP11473 427 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 TDGF1P13385 188 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 EIF2DP41214 584 aaKnown RBP11.56□□□□□ -0.56
CAPN1-221ENST00000531068 PLA2G4AP47712 749 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 COPB1P53618 953 aaKnown RBP11.56□□□□□ -0.56
CAPN1-221ENST00000531068 GAD2Q05329 585 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 KCNH2Q12809 1159 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 LRMPQ12912 555 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 KCNJ12Q14500 433 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 SGO2Q562F6 1265 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 HSP90AA4PQ58FG1 418 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 MIIPQ5JXC2 388 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 BTBD8Q5XKL5 378 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 RHBDF2Q6PJF5 856 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 NUDT18Q6ZVK8 323 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 HTR3DQ70Z44 454 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 CCDC186Q7Z3E2 898 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 LONP2Q86WA8 852 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 TRIM59Q8IWR1 403 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 SUMF1Q8NBK3 374 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 EHBP1Q8NDI1 1231 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 ACDQ96AP0 544 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 CHFRQ96EP1 664 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 ARID3AQ99856 593 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 HINFPQ9BQA5 517 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 EPC1Q9H2F5 836 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 CLIC5Q9NZA1 410 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 DNMT3LQ9UJW3 386 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 NAGPAQ9UK23 515 aa11.56□□□□□ -0.56
CAPN1-221ENST00000531068 ZFHX2Q9C0A1 2572 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-221ENST00000531068 KMT2EQ8IZD2 1858 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 A0A1W2PQH9 124 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 K7ESF4 209 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 CYP26A1O43174 497 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 TEX33O43247 280 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 RNF40O75150 1001 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 TBX18O95935 607 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 AFPP02771 609 aaKnown RBP11.55□□□□□ -0.56
CAPN1-221ENST00000531068 CYP17A1P05093 508 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 RARGP13631 454 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 CD19P15391 556 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 BCAT1P54687 386 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 UBASH3AP57075 661 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 COG7P83436 770 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 TBX2Q13207 712 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-221ENST00000531068 C10orf120Q5SQS8 335 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 GPRIN1Q7Z2K8 1008 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 CAMKK1Q8N5S9 505 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 GPR161Q8N6U8 529 aaKnown RBP11.55□□□□□ -0.56
CAPN1-221ENST00000531068 ZFRQ96KR1 1074 aaKnown RBP11.55□□□□□ -0.56
CAPN1-221ENST00000531068 PNKPQ96T60 521 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 KLF16Q9BXK1 252 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-221ENST00000531068 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.55□□□□□ -0.56
CAPN1-221ENST00000531068 NCDNQ9UBB6 729 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 LSM7Q9UK45 103 aaKnown RBP11.55□□□□□ -0.56
CAPN1-221ENST00000531068 PCDHB4Q9Y5E5 795 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 TSC2P49815 1807 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 F5P12259 2224 aa11.55□□□□□ -0.56
CAPN1-221ENST00000531068 LGALS16A8MUM7 142 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 XPO1O14980 1071 aaKnown RBP11.54□□□□□ -0.56
CAPN1-221ENST00000531068 ZBED1O96006 694 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 TUBB4AP04350 444 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 ADH5P11766 374 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 OPRD1P41143 372 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 GRIA2P42262 883 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 FNTBP49356 437 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 GCNT1Q02742 428 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 BST2Q10589 180 aaKnown RBP11.54□□□□□ -0.56
CAPN1-221ENST00000531068 SIM2Q14190 667 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-221ENST00000531068 STILQ15468 1287 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 CNGA2Q16280 664 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 TPD52L1Q16890 204 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-221ENST00000531068 GOLGA7BQ2TAP0 167 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 LY6G5CQ5SRR4 150 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 DPY19L2P1Q6NXN4 242 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 TMEM270Q6UE05 265 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 SYT13Q7L8C5 426 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 PIGZQ86VD9 579 aa11.54□□□□□ -0.56
CAPN1-221ENST00000531068 WDR5BQ86VZ2 330 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms