RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 CCDC150Q8NCX0 1101 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 DDX1Q92499 740 aaKnown RBP16.66■□□□□ 0.26
CPSF1-205ENST00000531042 JAKMIP2Q96AA8 810 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 PNPLA8Q9NP80 782 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 OSER1Q9NX31 292 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 PCDHA5Q9Y5H7 936 aa16.66■□□□□ 0.26
CPSF1-205ENST00000531042 BCLAF3A2AJT9 711 aaKnown RBP16.65■□□□□ 0.26
CPSF1-205ENST00000531042 TM4SF5O14894 197 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 CYP26A1O43174 497 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 GREM1O60565 184 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 TULP3O75386 442 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 ALDH1A2O94788 518 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 ACO1P21399 889 aaKnown RBP16.65■□□□□ 0.26
CPSF1-205ENST00000531042 ATP5C1P36542 298 aaKnown RBP16.65■□□□□ 0.26
CPSF1-205ENST00000531042 CREB5Q02930 508 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 ANO4Q32M45 955 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 PREPLQ4J6C6 727 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-205ENST00000531042 EOGTQ5NDL2 527 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 PPP1R26Q5T8A7 1209 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-205ENST00000531042 STPG1Q5TH74 334 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 PMS2CLQ68D20 193 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 KRT39Q6A163 491 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 TTC30AQ86WT1 665 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 SMYD4Q8IYR2 804 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-205ENST00000531042 OLIG1Q8TAK6 271 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 SEMA4DQ92854 862 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 NMUR1Q9HB89 426 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 POLMQ9NP87 494 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-205ENST00000531042 ZDHHC4Q9NPG8 344 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 DEC1Q9P2X7 70 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 THADAQ6YHU6 1953 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 NUP205Q92621 2012 aa16.65■□□□□ 0.26
CPSF1-205ENST00000531042 ABCA7Q8IZY2 2146 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 A0A1W2PQH9 124 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 TBC1D3BA6NDS4 549 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 ADAM23O75077 832 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 CAVIN2O95810 425 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 BCKDHBP21953 392 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 KIF11P52732 1056 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 TCEAL6Q6IPX3 200 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 KCNV2Q8TDN2 545 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 TCEAL3Q969E4 200 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 EEF2KMTQ96G04 330 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 CCDC34Q96HJ3 373 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 FAXDC2Q96IV6 333 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 DUSP16Q9BY84 665 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 DNAI2Q9GZS0 605 aa16.64■□□□□ 0.25
CPSF1-205ENST00000531042 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.64■□□□□ 0.257e-8■□□□□ 8.9
CPSF1-205ENST00000531042 TRIM24O15164 1050 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 CETN3O15182 167 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 RARGP13631 454 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 GOLGA8FQ08AF8 430 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 GOLGA8DPQ0D2H9 430 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 PNOCQ13519 176 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 ZNF394Q53GI3 561 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 KLHDC10Q6PID8 442 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 NUDT18Q6ZVK8 323 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 ZNF276Q8N554 614 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 TERB1Q8NA31 727 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 FBXL13Q8NEE6 735 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 CNTNAP3BQ96NU0 1288 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 CNTNAP3Q9BZ76 1288 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 RAB20Q9NX57 234 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 DNMT3LQ9UJW3 386 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 LSM7Q9UK45 103 aaKnown RBP16.63■□□□□ 0.25
CPSF1-205ENST00000531042 NUDT5Q9UKK9 219 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 USP3Q9Y6I4 520 aa16.63■□□□□ 0.25
CPSF1-205ENST00000531042 MYO18AQ92614 2054 aaKnown RBP16.63■□□□□ 0.25
CPSF1-205ENST00000531042 MDM4O15151 490 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 STX10O60499 249 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 EPB41P11171 864 aaKnown RBP16.62■□□□□ 0.25
CPSF1-205ENST00000531042 P2RY2P41231 377 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 PRCPP42785 496 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 PLA2G4AP47712 749 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 PSEN1P49768 467 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 MXI1P50539 228 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 C10orf76Q5T2E6 689 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 CCDC186Q7Z3E2 898 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 SCD5Q86SK9 330 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 FMR1NBQ8N0W7 255 aaPredicted RBP16.62■□□□□ 0.25
CPSF1-205ENST00000531042 TTC39CQ8N584 583 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 ZNF513Q8N8E2 541 aaPredicted RBP16.62■□□□□ 0.25
CPSF1-205ENST00000531042 SLC4A11Q8NBS3 891 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 RLN3Q8WXF3 142 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 HEXIM2Q96MH2 286 aaKnown RBP16.62■□□□□ 0.25
CPSF1-205ENST00000531042 CISHQ9NSE2 258 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 RMND1Q9NWS8 449 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 MARK1Q9P0L2 795 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 BCCIPQ9P287 314 aaKnown RBP eCLIP16.62■□□□□ 0.25
CPSF1-205ENST00000531042 NAGPAQ9UK23 515 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 HCN2Q9UL51 889 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 STARD13Q9Y3M8 1113 aa16.62■□□□□ 0.25
CPSF1-205ENST00000531042 PLXND1Q9Y4D7 1925 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 TCRBV21S2A2A0A5A6 115 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 NEDD8-MDP1E9PL57 170 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 CACNG3O60359 315 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 TYRP14679 529 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 RAD23BP54727 409 aa16.61■□□□□ 0.25
CPSF1-205ENST00000531042 COBLL1Q53SF7 1204 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms