RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ZNF622Q969S3 477 aaKnown RBP eCLIP8.44□□□□□ -1.06
CSDE1-213ENST00000530784 FAM136AQ96C01 138 aa8.44□□□□□ -1.06
CSDE1-213ENST00000530784 B3GNT5Q9BYG0 378 aa8.44□□□□□ -1.06
CSDE1-213ENST00000530784 SLC17A6Q9P2U8 582 aa8.44□□□□□ -1.06
CSDE1-213ENST00000530784 NUDCQ9Y266 331 aa8.44□□□□□ -1.06
CSDE1-213ENST00000530784 CAMTA2O94983 1202 aa8.43□□□□□ -1.06
CSDE1-213ENST00000530784 A1BGP04217 495 aa8.43□□□□□ -1.06
CSDE1-213ENST00000530784 NPR1P16066 1061 aa8.43□□□□□ -1.06
CSDE1-213ENST00000530784 MINDY4Q4G0A6 757 aa8.43□□□□□ -1.06
CSDE1-213ENST00000530784 ANO6Q4KMQ2 910 aa8.43□□□□□ -1.06
CSDE1-213ENST00000530784 NXNQ6DKJ4 435 aa8.43□□□□□ -1.06
CSDE1-213ENST00000530784 TCEAL8Q8IYN2 117 aa8.43□□□□□ -1.06
CSDE1-213ENST00000530784 SPATA5L1Q9BVQ7 753 aa8.43□□□□□ -1.06
CSDE1-213ENST00000530784 TAOK3Q9H2K8 898 aa8.43□□□□□ -1.06
CSDE1-213ENST00000530784 KLK15Q9H2R5 256 aa8.43□□□□□ -1.06
CSDE1-213ENST00000530784 SEMA4GQ9NTN9 838 aa8.43□□□□□ -1.06
CSDE1-213ENST00000530784 TCEAL9Q9UHQ7 104 aa8.43□□□□□ -1.06
CSDE1-213ENST00000530784 LINC00473A8K010 186 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 KCNQ3O43525 872 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 ORC4O43929 436 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 PDHA1P08559 390 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 KITP10721 976 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 IQCB1Q15051 598 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 LAYNQ6UX15 382 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 ZNF575Q86XF7 245 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 MAGEB6Q8N7X4 407 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 RFKQ969G6 155 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 FKBP10Q96AY3 582 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 SERHLQ9NQF3 203 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 ASB6Q9NWX5 421 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-213ENST00000530784 XPR1Q9UBH6 696 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 DKK3Q9UBP4 350 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 ST3GAL5Q9UNP4 418 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 COX11Q9Y6N1 276 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 BCORQ6W2J9 1755 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 ANKRD31Q8N7Z5 1873 aa8.42□□□□□ -1.06
CSDE1-213ENST00000530784 SBF1O95248 1867 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 A0A1W2PPL8 197 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 PPM1DO15297 605 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 TSPAN6O43657 245 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 C1QL1O75973 258 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 IGLV2-14P01704 120 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 ATXN1LP0C7T5 689 aaKnown RBP8.41□□□□□ -1.06
CSDE1-213ENST00000530784 PIP4K2AP48426 406 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-213ENST00000530784 ELLP55199 621 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-213ENST00000530784 UCP3P55916 312 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 LILRA4P59901 499 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 GPSM2P81274 684 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 MLC1Q15049 377 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 TBCCQ15814 346 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 DPY19L2P1Q6NXN4 242 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 MCM10Q7L590 875 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 NBPF5PQ86XG9 351 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-213ENST00000530784 NTN5Q8WTR8 489 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-213ENST00000530784 MASTLQ96GX5 879 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 NELL2Q99435 816 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 TRIM54Q9BYV2 358 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 TMEM60Q9H2L4 133 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 ATP6V0A4Q9HBG4 840 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 TMX2Q9Y320 296 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 USP16Q9Y5T5 823 aa8.41□□□□□ -1.06
CSDE1-213ENST00000530784 THP07101 528 aa8.4□□□□□ -1.06
CSDE1-213ENST00000530784 NR2F6P10588 404 aa8.4□□□□□ -1.06
CSDE1-213ENST00000530784 PPP2R1AP30153 589 aa8.4□□□□□ -1.06
CSDE1-213ENST00000530784 PXNP49023 591 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-213ENST00000530784 SLC11A2P49281 568 aa8.4□□□□□ -1.06
CSDE1-213ENST00000530784 ARFIP2P53365 341 aa8.4□□□□□ -1.06
CSDE1-213ENST00000530784 LOXL3P58215 753 aa8.4□□□□□ -1.06
CSDE1-213ENST00000530784 EIF2B5Q13144 721 aaKnown RBP8.4□□□□□ -1.06
CSDE1-213ENST00000530784 AKNAD1Q5T1N1 836 aa8.4□□□□□ -1.06
CSDE1-213ENST00000530784 CLEC4GQ6UXB4 293 aa8.4□□□□□ -1.06
CSDE1-213ENST00000530784 GRASPQ7Z6J2 395 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-213ENST00000530784 PBKQ96KB5 322 aa8.4□□□□□ -1.06
CSDE1-213ENST00000530784 ALG8Q9BVK2 526 aa8.4□□□□□ -1.06
CSDE1-213ENST00000530784 PTGFRNQ9P2B2 879 aa8.4□□□□□ -1.06
CSDE1-213ENST00000530784 ENTPD2Q9Y5L3 495 aa8.4□□□□□ -1.06
CSDE1-213ENST00000530784 HTATSF1O43719 755 aaKnown RBP8.39□□□□□ -1.07
CSDE1-213ENST00000530784 VIPR2P41587 438 aa8.39□□□□□ -1.07
CSDE1-213ENST00000530784 DCTN1Q14203 1278 aa8.39□□□□□ -1.07
CSDE1-213ENST00000530784 LLGL1Q15334 1064 aa8.39□□□□□ -1.07
CSDE1-213ENST00000530784 ARHGAP29Q52LW3 1261 aa8.39□□□□□ -1.07
CSDE1-213ENST00000530784 TSTD2Q5T7W7 516 aa8.39□□□□□ -1.07
CSDE1-213ENST00000530784 SWSAP1Q6NVH7 229 aa8.39□□□□□ -1.07
CSDE1-213ENST00000530784 KBTBD7Q8WVZ9 684 aa8.39□□□□□ -1.07
CSDE1-213ENST00000530784 ZNF764Q96H86 408 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-213ENST00000530784 UROC1Q96N76 676 aa8.39□□□□□ -1.07
CSDE1-213ENST00000530784 C1orf112Q9NSG2 853 aa8.39□□□□□ -1.07
CSDE1-213ENST00000530784 EHD3Q9NZN3 535 aa8.39□□□□□ -1.07
CSDE1-213ENST00000530784 ARFGEF2Q9Y6D5 1785 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 CAPN8A6NHC0 703 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 LRRC3CA6NJW4 275 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 PHGDHO43175 533 aaKnown RBP8.38□□□□□ -1.07
CSDE1-213ENST00000530784 DDNO94850 711 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-213ENST00000530784 ZFXP17010 805 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-213ENST00000530784 SP2Q02086 613 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 ARHGAP40Q5TG30 622 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 ICE2Q659A1 982 aa8.38□□□□□ -1.07
CSDE1-213ENST00000530784 SFRP4Q6FHJ7 346 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-213ENST00000530784 MAEAQ7L5Y9 396 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms