RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 PGFP49763 221 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 GFPT1Q06210 699 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-219ENST00000530495 ZNF33AQ06730 810 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 BIRC3Q13489 604 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 NCOA4Q13772 614 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 ZNF699Q32M78 642 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 RABEPKQ7Z6M1 372 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 MIB1Q86YT6 1006 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 DEFB119Q8N690 84 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 TMEM174Q8WUU8 243 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 SMOQ99835 787 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 KLF16Q9BXK1 252 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-219ENST00000530495 NACA2Q9H009 215 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 BLZF1Q9H2G9 400 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 CAPN10Q9HC96 672 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 CD248Q9HCU0 757 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 TLR8Q9NR97 1041 aaKnown RBP15.79■□□□□ 0.12
CAPN1-219ENST00000530495 DMAC2Q9NW81 257 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 CALCOCO1Q9P1Z2 691 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 ZZEF1O43149 2961 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 AKAP13Q12802 2813 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 LRRIQ3A6PVS8 624 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-219ENST00000530495 ZBTB24O43167 697 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-219ENST00000530495 CACNG3O60359 315 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 TLR5O60602 858 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 ZNF217O75362 1048 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 IRF1P10914 325 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 WASP42768 502 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 ATXN3P54252 364 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-219ENST00000530495 SGSM1Q2NKQ1 1148 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 GRAMD4Q6IC98 578 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 SDE2Q6IQ49 451 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 GOLGA5Q8TBA6 731 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 ELMO3Q96BJ8 720 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 XPO6Q96QU8 1125 aaKnown RBP15.78■□□□□ 0.12
CAPN1-219ENST00000530495 ACOX2Q99424 681 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 CYLDQ9NQC7 956 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 KRT82Q9NSB4 513 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 DNAJC17Q9NVM6 304 aaKnown RBP15.78■□□□□ 0.12
CAPN1-219ENST00000530495 WDR35Q9P2L0 1181 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 PCDH15Q96QU1 1955 aa15.78■□□□□ 0.12
CAPN1-219ENST00000530495 IGHV1OR15-9A0A0B4J2B8 117 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 SPAARA0A1B0GVQ0 90 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 HYAL3O43820 417 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-219ENST00000530495 TBX18O95935 607 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 RPN1P04843 607 aaKnown RBP15.77■□□□□ 0.12
CAPN1-219ENST00000530495 P4HA1P13674 534 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 CCDC130P13994 396 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 TYRP14679 529 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 ATP5C1P36542 298 aaKnown RBP15.77■□□□□ 0.12
CAPN1-219ENST00000530495 MAP3K7CLP57077 242 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 CUL4BQ13620 913 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 EGFLAMQ63HQ2 1017 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 UNC93AQ86WB7 457 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 SLC9A9Q8IVB4 645 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 CHPFQ8IZ52 775 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 HDDC3Q8N4P3 179 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 SLC2A14Q8TDB8 520 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 IPO4Q8TEX9 1081 aaKnown RBP15.77■□□□□ 0.12
CAPN1-219ENST00000530495 TAF4BQ92750 862 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 GABRG3Q99928 467 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 GTPBP2Q9BX10 602 aaKnown RBP15.77■□□□□ 0.12
CAPN1-219ENST00000530495 BBS2Q9BXC9 721 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 FSCN3Q9NQT6 498 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 MARK1Q9P0L2 795 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 SCML2Q9UQR0 700 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 MSRB2Q9Y3D2 182 aa15.77■□□□□ 0.12
CAPN1-219ENST00000530495 A0A1W2PQD8 194 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 FAM221BA6H8Z2 402 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 SRRM3A6NNA2 597 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-219ENST00000530495 PRRT4C9JH25 899 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 NEDD8-MDP1E9PL57 170 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 ARHGAP33O14559 1287 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 OPHN1O60890 802 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 CISD3P0C7P0 127 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 NDUFV2P19404 249 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 AFMP43652 599 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 NDST1P52848 882 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 DLG4P78352 724 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 SIM1P81133 766 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-219ENST00000530495 ZACNQ401N2 412 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 KIAA1211LQ6NV74 962 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 KLHDC10Q6PID8 442 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 SCARA5Q6ZMJ2 495 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 SLC41A1Q8IVJ1 513 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 MINDY1Q8N5J2 469 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 C12orf29Q8N999 325 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 ZNF419Q96HQ0 510 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-219ENST00000530495 OSER1Q9NX31 292 aa15.76■□□□□ 0.11
CAPN1-219ENST00000530495 HHLA1C9JL84 531 aa15.75■□□□□ 0.11
CAPN1-219ENST00000530495 H0Y626 953 aa15.75■□□□□ 0.11
CAPN1-219ENST00000530495 K7ELQ4 463 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-219ENST00000530495 GFRA2O00451 464 aa15.75■□□□□ 0.11
CAPN1-219ENST00000530495 IKBKBO14920 756 aa15.75■□□□□ 0.11
CAPN1-219ENST00000530495 CLSTN1O94985 981 aa15.75■□□□□ 0.11
CAPN1-219ENST00000530495 TRIM16O95361 564 aa15.75■□□□□ 0.11
CAPN1-219ENST00000530495 SYPP08247 313 aa15.75■□□□□ 0.11
CAPN1-219ENST00000530495 CD59P13987 128 aa15.75■□□□□ 0.11
CAPN1-219ENST00000530495 RDXP35241 583 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms