RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 MXI1P50539 228 aa22.05■■□□□ 1.12
SMPD1-204ENST00000530395 CREB5Q02930 508 aa22.05■■□□□ 1.12
SMPD1-204ENST00000530395 GPRIN1Q7Z2K8 1008 aa22.05■■□□□ 1.12
SMPD1-204ENST00000530395 IL17RCQ8NAC3 791 aa22.05■■□□□ 1.12
SMPD1-204ENST00000530395 MDGA1Q8NFP4 955 aa22.05■■□□□ 1.12
SMPD1-204ENST00000530395 GDPD2Q9HCC8 539 aa22.05■■□□□ 1.12
SMPD1-204ENST00000530395 MYO18AQ92614 2054 aaKnown RBP22.05■■□□□ 1.12
SMPD1-204ENST00000530395 TBC1D3BA6NDS4 549 aa22.04■■□□□ 1.12
SMPD1-204ENST00000530395 CETN3O15182 167 aa22.04■■□□□ 1.12
SMPD1-204ENST00000530395 MESP2Q0VG99 397 aa22.04■■□□□ 1.12
SMPD1-204ENST00000530395 TRMT11Q7Z4G4 463 aaKnown RBP22.04■■□□□ 1.12
SMPD1-204ENST00000530395 TADA2BQ86TJ2 420 aa22.04■■□□□ 1.12
SMPD1-204ENST00000530395 SFTPA1Q8IWL2 248 aa22.04■■□□□ 1.12
SMPD1-204ENST00000530395 ETFBKMTQ8IXQ9 262 aa22.04■■□□□ 1.12
SMPD1-204ENST00000530395 NAT16Q8N8M0 369 aa22.04■■□□□ 1.12
SMPD1-204ENST00000530395 FAXDC2Q96IV6 333 aa22.04■■□□□ 1.12
SMPD1-204ENST00000530395 BCCIPQ9P287 314 aaKnown RBP eCLIP22.04■■□□□ 1.12
SMPD1-204ENST00000530395 INVSQ9Y283 1065 aa22.04■■□□□ 1.12
SMPD1-204ENST00000530395 ABCA7Q8IZY2 2146 aa22.04■■□□□ 1.12
SMPD1-204ENST00000530395 ANTXRLA6NF34 631 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 HHLA1C9JL84 531 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 SGK1O00141 431 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 TULP3O75386 442 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 KIR2DL1P43626 348 aaPredicted RBP22.03■■□□□ 1.12
SMPD1-204ENST00000530395 PGFP49763 221 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 PSEN1P49768 467 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 PMS2CLQ68D20 193 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 TMEM92Q6UXU6 159 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 HTR3DQ70Z44 454 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 TMEM25Q86YD3 366 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 SMYD4Q8IYR2 804 aaPredicted RBP22.03■■□□□ 1.12
SMPD1-204ENST00000530395 PHTF2Q8N3S3 785 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 FBXL13Q8NEE6 735 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 KCNV2Q8TDN2 545 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 WHAMMQ8TF30 809 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 SPACA7Q96KW9 195 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 KLF16Q9BXK1 252 aaPredicted RBP22.03■■□□□ 1.12
SMPD1-204ENST00000530395 SMOC1Q9H4F8 434 aa22.03■■□□□ 1.12
SMPD1-204ENST00000530395 PLXND1Q9Y4D7 1925 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 BCLAF3A2AJT9 711 aaKnown RBP22.02■■□□□ 1.12
SMPD1-204ENST00000530395 GOLGA6L4A6NEF3 574 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 CAVIN2O95810 425 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 TBX18O95935 607 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 ADRB1P08588 477 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 RARGP13631 454 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 KCNA4P22459 653 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 PNOCQ13519 176 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 ZNF394Q53GI3 561 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 STPG1Q5TH74 334 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 KLHDC10Q6PID8 442 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 TERB1Q8NA31 727 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 WBP2Q969T9 261 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 XPO6Q96QU8 1125 aaKnown RBP22.02■■□□□ 1.12
SMPD1-204ENST00000530395 CDK5RAP1Q96SZ6 601 aaKnown RBP22.02■■□□□ 1.12
SMPD1-204ENST00000530395 TSG101Q99816 390 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 DUSP16Q9BY84 665 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.02■■□□□ 1.12
SMPD1-204ENST00000530395 DNMT3LQ9UJW3 386 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 NAGPAQ9UK23 515 aa22.02■■□□□ 1.12
SMPD1-204ENST00000530395 TPRP12270 2363 aaKnown RBP22.02■■□□□ 1.11
SMPD1-204ENST00000530395 ACACBO00763 2458 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 A0A1W2PQH9 124 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 CHRM1P11229 460 aaPredicted RBP22.01■■□□□ 1.11
SMPD1-204ENST00000530395 KIF11P52732 1056 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 MCCD1P59942 119 aaPredicted RBP22.01■■□□□ 1.11
SMPD1-204ENST00000530395 BYSLQ13895 437 aaKnown RBP22.01■■□□□ 1.11
SMPD1-204ENST00000530395 C10orf120Q5SQS8 335 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 C10orf76Q5T2E6 689 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 PPP1R26Q5T8A7 1209 aaPredicted RBP22.01■■□□□ 1.11
SMPD1-204ENST00000530395 EMC10Q5UCC4 262 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 GRAMD4Q6IC98 578 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 CCDC186Q7Z3E2 898 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 ZNF513Q8N8E2 541 aaPredicted RBP22.01■■□□□ 1.11
SMPD1-204ENST00000530395 EEF2KMTQ96G04 330 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 HEXIM2Q96MH2 286 aaKnown RBP22.01■■□□□ 1.11
SMPD1-204ENST00000530395 FAM124BQ9H5Z6 455 aaPredicted RBP22.01■■□□□ 1.11
SMPD1-204ENST00000530395 NMUR1Q9HB89 426 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 RXFP3Q9NSD7 469 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 OSER1Q9NX31 292 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 RAB20Q9NX57 234 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 WDR35Q9P2L0 1181 aa22.01■■□□□ 1.11
SMPD1-204ENST00000530395 CIZ1Q9ULV3 898 aaPredicted RBP22.01■■□□□ 1.11
SMPD1-204ENST00000530395 NEDD8-MDP1E9PL57 170 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 SMC2O95347 1197 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 RALAP11233 206 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 HNRNPLP14866 589 aaKnown RBP eCLIP22■■□□□ 1.11
SMPD1-204ENST00000530395 PLA2G4AP47712 749 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 TCERG1LQ5VWI1 586 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 RNF43Q68DV7 783 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 CYP2U1Q7Z449 544 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 OLIG1Q8TAK6 271 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 HMGB4Q8WW32 186 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 SEMA4DQ92854 862 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 BBS2Q9BXC9 721 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 ZDHHC4Q9NPG8 344 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 CISHQ9NSE2 258 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 DNAJC17Q9NVM6 304 aaKnown RBP22■■□□□ 1.11
SMPD1-204ENST00000530395 GTF3C3Q9Y5Q9 886 aa22■■□□□ 1.11
SMPD1-204ENST00000530395 TCRBV21S2A2A0A5A6 115 aa21.99■■□□□ 1.11
SMPD1-204ENST00000530395 SLC16A3O15427 465 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms