RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 MPOP05164 745 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 RPL10AP62906 217 aaKnown RBP13.34□□□□□ -0.27
MACF1-230ENST00000530275 OTUD4Q01804 1114 aaKnown RBP13.34□□□□□ -0.27
MACF1-230ENST00000530275 CTXN3Q4LDR2 81 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 SPOCD1Q6ZMY3 1216 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 KAT2BQ92831 832 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 PPP1R14AQ96A00 147 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 CNPY3Q9BT09 278 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 SENP2Q9HC62 589 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 VPS28Q9UK41 221 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 PSMD7P51665 324 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 SMIM5Q71RC9 77 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 VN1R5Q7Z5H4 357 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 LRRC6Q86X45 466 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 SLC22A9Q8IVM8 553 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 AP4E1Q9UPM8 1137 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 STAU1O95793 577 aaKnown RBP13.34□□□□□ -0.27
MACF1-230ENST00000530275 SUPT20HL2P0C7V6 817 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 CCNG1P51959 295 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 EFEMP1Q12805 493 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 PAN2Q504Q3 1202 aaKnown RBP13.34□□□□□ -0.27
MACF1-230ENST00000530275 KCNT1Q5JUK3 1230 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 NOA1Q8NC60 698 aaKnown RBP13.34□□□□□ -0.27
MACF1-230ENST00000530275 ANKRD7Q92527 254 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 PAFAH2Q99487 392 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 EPS8L2Q9H6S3 715 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 TFR2Q9UP52 801 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 CKBP12277 381 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 FCGR1AP12314 374 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 CYP11B1P15538 503 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 POU1F1P28069 291 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 EPHB3P54753 998 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 HUNKP57058 714 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 B3GALNT2Q8NCR0 500 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 VPS33AQ96AX1 596 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 KLHL4Q9C0H6 718 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 TMBIM4Q9HC24 238 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 GSTM1P09488 218 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 LHX1P48742 406 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 FBXO33Q7Z6M2 555 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 SLC20A1Q8WUM9 679 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 DEFB129Q9H1M3 183 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 TRPM5Q9NZQ8 1165 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 USP18Q9UMW8 372 aa13.34□□□□□ -0.27
MACF1-230ENST00000530275 CALB2P22676 271 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 HALP42357 657 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 CCT8P50990 548 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 KPNA1P52294 538 aaPredicted RBP13.33□□□□□ -0.28
MACF1-230ENST00000530275 AQP5P55064 265 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 USP49Q70CQ1 688 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 WDR49Q8IV35 697 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 DPP10Q8N608 796 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 CENPTQ96BT3 561 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 CDK5RAP1Q96SZ6 601 aaKnown RBP13.33□□□□□ -0.28
MACF1-230ENST00000530275 TRIM24O15164 1050 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 URODP06132 367 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 PLEKP08567 350 aaPredicted RBP13.33□□□□□ -0.28
MACF1-230ENST00000530275 C11orf63Q6NUN7 778 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 HOMEZQ8IX15 550 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 RERGLQ9H628 205 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 VTA1Q9NP79 307 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 RGS18Q9NS28 235 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 COMMD8Q9NX08 183 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 NTSR2O95665 410 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 ACADMP11310 421 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 COX10Q12887 443 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 ZCWPW2Q504Y3 356 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 ZCCHC8Q6NZY4 707 aaKnown RBP13.33□□□□□ -0.28
MACF1-230ENST00000530275 MTSS1LQ765P7 747 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 GANQ9H2C0 597 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 ARMC7Q9H6L4 198 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 GPAMQ9HCL2 828 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 GPR75-ASB3A0A0A6YYF3 556 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 SLC12A8A0AV02 714 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 LSM8O95777 96 aaKnown RBP13.33□□□□□ -0.28
MACF1-230ENST00000530275 PDIA6Q15084 440 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 GSTA3Q16772 222 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 PLEKHH3Q7Z736 793 aa13.33□□□□□ -0.28
MACF1-230ENST00000530275 FAM25AB3EWG3 89 aa13.32□□□□□ -0.28
MACF1-230ENST00000530275 FAM25CB3EWG5 89 aa13.32□□□□□ -0.28
MACF1-230ENST00000530275 FAM25GB3EWG6 89 aa13.32□□□□□ -0.28
MACF1-230ENST00000530275 O00370 1275 aa13.32□□□□□ -0.28
MACF1-230ENST00000530275 FOXN3O00409 490 aaPredicted RBP13.32□□□□□ -0.28
MACF1-230ENST00000530275 TM9SF1O15321 606 aa13.32□□□□□ -0.28
MACF1-230ENST00000530275 CNOT3O75175 753 aaKnown RBP13.32□□□□□ -0.28
MACF1-230ENST00000530275 NFICP08651 508 aa13.32□□□□□ -0.28
MACF1-230ENST00000530275 YWHAQP27348 245 aa13.32□□□□□ -0.28
MACF1-230ENST00000530275 GTF2E2P29084 291 aaKnown RBP13.32□□□□□ -0.28
MACF1-230ENST00000530275 YWHAZP63104 245 aaKnown RBP13.32□□□□□ -0.28
MACF1-230ENST00000530275 TRAF2Q12933 501 aa13.32□□□□□ -0.28
MACF1-230ENST00000530275 TRIM25Q14258 630 aaKnown RBP13.32□□□□□ -0.28
MACF1-230ENST00000530275 CSHL1Q14406 222 aa13.32□□□□□ -0.28
MACF1-230ENST00000530275 APBB2Q92870 758 aa13.32□□□□□ -0.28
MACF1-230ENST00000530275 CCDC3Q9BQI4 270 aa13.32□□□□□ -0.28
MACF1-230ENST00000530275 SYNCRIPO60506 623 aaKnown RBP13.32□□□□□ -0.28
MACF1-230ENST00000530275 MED24O75448 989 aa13.32□□□□□ -0.28
MACF1-230ENST00000530275 VTNP04004 478 aa13.32□□□□□ -0.28
MACF1-230ENST00000530275 FEN1P39748 380 aaKnown RBP13.32□□□□□ -0.28
MACF1-230ENST00000530275 SARSP49591 514 aaKnown RBP13.32□□□□□ -0.28
MACF1-230ENST00000530275 CBWD2Q8IUF1 395 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms