RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 METTL3Q86U44 580 aaKnown RBP11.06□□□□□ -0.64
COPB1-207ENST00000529866 TMEM25Q86YD3 366 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 NUP93Q8N1F7 819 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 OR6B3Q8NGW1 331 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 BAHD1Q8TBE0 780 aaPredicted RBP11.06□□□□□ -0.64
COPB1-207ENST00000529866 SLC39A7Q92504 469 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 ERLEC1Q96DZ1 483 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 FAM84AQ96KN4 292 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 DCBLD2Q96PD2 775 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 ACOX2Q99424 681 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 BBS2Q9BXC9 721 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 CD248Q9HCU0 757 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.06□□□□□ -0.647e-6■■■■■ 74.5
COPB1-207ENST00000529866 INTS13Q9NVM9 706 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 TOR4AQ9NXH8 423 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 WDR35Q9P2L0 1181 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 HCN2Q9UL51 889 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 SMC3Q9UQE7 1217 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 FNDC3AQ9Y2H6 1198 aaKnown RBP11.06□□□□□ -0.64
COPB1-207ENST00000529866 PCDHB13Q9Y5F0 798 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 RAD54BQ9Y620 910 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 TNRC6BQ9UPQ9 1833 aaKnown RBP11.06□□□□□ -0.64
COPB1-207ENST00000529866 MYH11P35749 1972 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 PTPRDP23468 1912 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 GOLGA4Q13439 2230 aaKnown RBP11.05□□□□□ -0.64
COPB1-207ENST00000529866 GOLGA8CPA6NN73 597 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 H3BQV1 296 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 NPC1O15118 1278 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 TRIM24O15164 1050 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 TACC1O75410 805 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 PRPF6O94906 941 aaKnown RBP11.05□□□□□ -0.64
COPB1-207ENST00000529866 ATXN1LP0C7T5 689 aaKnown RBP11.05□□□□□ -0.64
COPB1-207ENST00000529866 IRF1P10914 325 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 TYRP14679 529 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 OXTRP30559 389 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 DGKGP49619 791 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 ZNF132P52740 706 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 TNNC1P63316 161 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 KCNA1Q09470 495 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 HLA-BQ31612 363 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 INAVAQ3KP66 663 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 DCAF12L1Q5VU92 463 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 SNX30Q5VWJ9 437 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 DYMQ7RTS9 669 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 GPD1LQ8N335 351 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 PIP4K2CQ8TBX8 421 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 CBWD1Q9BRT8 395 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 STRA6Q9BX79 667 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 GPR174Q9BXC1 333 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 ZNF518BQ9C0D4 1074 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 SLC6A17Q9H1V8 727 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 IL21RQ9HBE5 538 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 CD93Q9NPY3 652 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 WSB2Q9NYS7 404 aaPredicted RBP11.05□□□□□ -0.64
COPB1-207ENST00000529866 MARK1Q9P0L2 795 aa11.05□□□□□ -0.64
COPB1-207ENST00000529866 USP36Q9P275 1121 aaKnown RBP11.05□□□□□ -0.64
COPB1-207ENST00000529866 LSM7Q9UK45 103 aaKnown RBP11.05□□□□□ -0.64
COPB1-207ENST00000529866 CFAP46Q8IYW2 2715 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 ZNF233A6NK53 670 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 A8MXQ7 604 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 ATXN7O15265 892 aaPredicted RBP11.04□□□□□ -0.64
COPB1-207ENST00000529866 TNFSF14O43557 240 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 SYNCRIPO60506 623 aaKnown RBP11.04□□□□□ -0.64
COPB1-207ENST00000529866 PRB1P04280 392 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 FAM163BP0C2L3 166 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 HLA-EP13747 358 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 PTPN1P18031 435 aaKnown RBP11.04□□□□□ -0.64
COPB1-207ENST00000529866 GRK6P43250 576 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 SLC5A3P53794 718 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 CUL4AQ13619 759 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 E2F5Q15329 346 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 SMAD1Q15797 465 aaKnown RBP11.04□□□□□ -0.64
COPB1-207ENST00000529866 SCARA3Q6AZY7 606 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 FAM173BQ6P4H8 233 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 LRRC69Q6ZNQ3 347 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 TPGS1Q6ZTW0 290 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 USP49Q70CQ1 688 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 WDR49Q8IV35 697 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 B3GALNT2Q8NCR0 500 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 LSM14AQ8ND56 463 aaKnown RBP11.04□□□□□ -0.64
COPB1-207ENST00000529866 ZSWIM2Q8NEG5 633 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 OR5B17Q8NGF7 314 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 NXPE2Q96DL1 559 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 CCSER2Q9H7U1 834 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 DMAP1Q9NPF5 467 aaPredicted RBP11.04□□□□□ -0.64
COPB1-207ENST00000529866 OLFML3Q9NRN5 406 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 TBC1D7Q9P0N9 293 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 STK17AQ9UEE5 414 aa11.04□□□□□ -0.64
COPB1-207ENST00000529866 TCHHQ07283 1943 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 METTL12A8MUP2 240 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 PRRT4C9JH25 899 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 CAPN9O14815 690 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 TLR5O60602 858 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 ACADMP11310 421 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 CCT8P50990 548 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 AFF3P51826 1226 aaKnown RBP11.03□□□□□ -0.64
COPB1-207ENST00000529866 CACNA2D1P54289 1103 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 CAMK2BQ13554 666 aa11.03□□□□□ -0.64
COPB1-207ENST00000529866 SF3A1Q15459 793 aaKnown RBP11.03□□□□□ -0.64
COPB1-207ENST00000529866 TEAD4Q15561 434 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms