RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 CYFIP2Q96F07 1278 aa16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 HNRNPABQ99729 332 aaKnown RBP16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 LSM14BQ9BX40 385 aaKnown RBP16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 GOLPH3LQ9H4A5 285 aa16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 MBD1Q9UIS9 605 aaPredicted RBP16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 FAM237AA0A1B0GTK4 181 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 CYP26A1O43174 497 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 KCNK5O95279 499 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 FAM200BP0CF97 657 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 ACO1P21399 889 aaKnown RBP16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 KRT85P78386 507 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 BTBD8Q5XKL5 378 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 HTR3DQ70Z44 454 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 ARMCX6Q7L4S7 300 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 MIB1Q86YT6 1006 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 TMEFF1Q8IYR6 380 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 DDX1Q92499 740 aaKnown RBP16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 PIGKQ92643 395 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 EEF2KMTQ96G04 330 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 EDEM2Q9BV94 578 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 FBXO44Q9H4M3 255 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 TLR8Q9NR97 1041 aaKnown RBP16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 BCCIPQ9P287 314 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 DEC1Q9P2X7 70 aa16.4■□□□□ 0.22
CLNS1A-210ENST00000528364 PI4KAP42356 2102 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 A0A1W2PQH9 124 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 TCRBV21S2A2A0A5A6 115 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 GIPC1O14908 333 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 MAPK13O15264 365 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 HOXC11O43248 304 aaPredicted RBP16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 MAP3K13O43283 966 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 ALDH1A2O94788 518 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 MYL1P05976 194 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 P2RY2P41231 377 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 IRX4P78413 519 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 INCA1Q0VD86 236 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 ADAM9Q13443 819 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 MAP7D1Q3KQU3 841 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 EOGTQ5NDL2 527 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 C10orf76Q5T2E6 689 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 KRBA2Q6ZNG9 492 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 TPGS1Q6ZTW0 290 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 CYP2U1Q7Z449 544 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 SCD5Q86SK9 330 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 FAM186BQ8IYM0 893 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 PGBD3Q8N328 593 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 DEFB119Q8N690 84 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 SEMA4DQ92854 862 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 P2RY11Q96G91 374 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 ACOX2Q99424 681 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 NT5C1AQ9BXI3 368 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 GDPD2Q9HCC8 539 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 POLMQ9NP87 494 aaPredicted RBP16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 SCML2Q9UQR0 700 aa16.39■□□□□ 0.21
CLNS1A-210ENST00000528364 LNP1A1A4G5 178 aa16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 KHNYNO15037 678 aaKnown RBP16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 CILPO75339 1184 aa16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 KIF20AO95235 890 aa16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 RARGP13631 454 aa16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 KRT13P13646 458 aa16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 ATP5C1P36542 298 aaKnown RBP16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 PTGER3P43115 390 aa16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 ZNF394Q53GI3 561 aa16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 PPP1R26Q5T8A7 1209 aaPredicted RBP16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 INTS8Q75QN2 995 aaKnown RBP16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 SMYD4Q8IYR2 804 aaPredicted RBP16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 ZNF513Q8N8E2 541 aaPredicted RBP16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 CYP3A43Q9HB55 503 aa16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 CYLDQ9NQC7 956 aa16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 TMEM74BQ9NUR3 256 aa16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 ASCC3Q8N3C0 2202 aaKnown RBP16.38■□□□□ 0.21
CLNS1A-210ENST00000528364 NEDD8-MDP1E9PL57 170 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 CDX4O14627 284 aaPredicted RBP16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 ZNF202O95125 648 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 PMLP29590 882 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 PSMC2P35998 433 aaKnown RBP16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 KIF11P52732 1056 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 NFIL3Q16649 462 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 HSF5Q4G112 596 aaPredicted RBP16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 EGFLAMQ63HQ2 1017 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 GRAMD4Q6IC98 578 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 PSAPL1Q6NUJ1 521 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 TOGARAM2Q6ZUX3 1019 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 C11orf74Q86VG3 221 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 GUF1Q8N442 669 aaKnown RBP16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 TERB1Q8NA31 727 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 TATDN2Q93075 761 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 BHMTQ93088 406 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 CCDC47Q96A33 483 aaKnown RBP16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 HEXIM2Q96MH2 286 aaKnown RBP16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 DUSP9Q99956 384 aaKnown RBP16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 BBS2Q9BXC9 721 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 NIF3L1Q9GZT8 377 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 DNAJC17Q9NVM6 304 aaKnown RBP16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 PLK2Q9NYY3 685 aa16.37■□□□□ 0.21
CLNS1A-210ENST00000528364 PRRT4C9JH25 899 aa16.36■□□□□ 0.21
CLNS1A-210ENST00000528364 CISD3P0C7P0 127 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms