RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 CDK20Q8IZL9 346 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 RIBC1Q8N443 379 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-216ENST00000527467 SH2D3CQ8N5H7 860 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 TRPV3Q8NET8 790 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 CELF1Q92879 486 aaKnown RBP7.46□□□□□ -1.21
CTNND1-216ENST00000527467 USP13Q92995 863 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-216ENST00000527467 ZSCAN10Q96SZ4 725 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-216ENST00000527467 CCSER1Q9C0I3 900 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 NEK6Q9HC98 313 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 SLC35C2Q9NQQ7 365 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 DYRK4Q9NR20 520 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 LATS2Q9NRM7 1088 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 TLR7Q9NYK1 1049 aaKnown RBP7.46□□□□□ -1.21
CTNND1-216ENST00000527467 TRPC4Q9UBN4 977 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 SLC9A2Q9UBY0 812 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 CPA4Q9UI42 421 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 NUP50Q9UKX7 468 aa7.46□□□□□ -1.21
CTNND1-216ENST00000527467 KIAA1210Q9ULL0 1709 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 M0R2C6 588 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 CLOCKO15516 846 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 MGRN1O60291 552 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 PARNO95453 639 aaKnown RBP7.46□□□□□ -1.22
CTNND1-216ENST00000527467 PCP11498 1178 aaKnown RBP7.46□□□□□ -1.22
CTNND1-216ENST00000527467 TAP1Q03518 808 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 ZNF211Q13398 564 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-216ENST00000527467 ZNF235Q14590 738 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 ITIH4Q14624 930 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 EPC2Q52LR7 807 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 LMBRD2Q68DH5 695 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-216ENST00000527467 PID1Q7Z2X4 250 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 ZNF280BQ86YH2 543 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 C4orf33Q8N1A6 199 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 C1orf131Q8NDD1 294 aaKnown RBP7.46□□□□□ -1.22
CTNND1-216ENST00000527467 OR6B3Q8NGW1 331 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 ATL2Q8NHH9 583 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 UTP15Q8TED0 518 aaKnown RBP7.46□□□□□ -1.22
CTNND1-216ENST00000527467 VMP1Q96GC9 406 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 FAR2Q96K12 515 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 CLCC1Q96S66 551 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 ISCA1Q9BUE6 129 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 RPF1Q9H9Y2 349 aaKnown RBP7.46□□□□□ -1.22
CTNND1-216ENST00000527467 PCMTD2Q9NV79 361 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 MEGF6O75095 1541 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 STMND1H3BQB6 276 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 PSMD12O00232 456 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-216ENST00000527467 PGK1P00558 417 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 MSL3P1P0C860 447 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 ALDH3A2P51648 485 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 ZNF200P98182 395 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-216ENST00000527467 PPARAQ07869 468 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 RGS1Q08116 209 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 KNOP1Q1ED39 458 aaKnown RBP7.46□□□□□ -1.22
CTNND1-216ENST00000527467 IRGCQ6NXR0 463 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 SPAG16Q8N0X2 631 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 GPD1LQ8N335 351 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 OSCP1Q8WVF1 389 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 DBNDD2Q9BQY9 259 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 NMRK1Q9NWW6 199 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 RNF186Q9NXI6 227 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-216ENST00000527467 GPN3Q9UHW5 284 aaPredicted RBP7.46□□□□□ -1.22
CTNND1-216ENST00000527467 TELO2Q9Y4R8 837 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 KNDC1Q76NI1 1749 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 NHSL1Q5SYE7 1610 aa7.46□□□□□ -1.22
CTNND1-216ENST00000527467 TMEM120BA0PK00 339 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 OR14I1A6ND48 311 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 PSIP1O75475 530 aaKnown RBP7.45□□□□□ -1.22
CTNND1-216ENST00000527467 SNRPAP09012 282 aaKnown RBP7.45□□□□□ -1.22
CTNND1-216ENST00000527467 ZNF24P17028 368 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 FASP25445 335 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 HOXC8P31273 242 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 TIMM10P62072 90 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 AP3B2Q13367 1082 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 POLA2Q14181 598 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 HIST2H2ACQ16777 129 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-216ENST00000527467 TRMT5Q32P41 509 aaKnown RBP7.45□□□□□ -1.22
CTNND1-216ENST00000527467 ANKRD40Q6AI12 368 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 HIST2H2AA3Q6FI13 130 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 ERAP2Q6P179 960 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 COMMD2Q86X83 199 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 ANKMY2Q8IV38 441 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 GALNT6Q8NCL4 622 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 PJA1Q8NG27 643 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 S100PBPQ96BU1 408 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 CHCHD6Q9BRQ6 235 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 FOXP1Q9H334 677 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-216ENST00000527467 MMADHCQ9H3L0 296 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-216ENST00000527467 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.45□□□□□ -1.22
CTNND1-216ENST00000527467 SLC25A13Q9UJS0 675 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 FBXO9Q9UK97 447 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-216ENST00000527467 PNMA8BQ9ULN7 279 aaPredicted RBP7.45□□□□□ -1.22
CTNND1-216ENST00000527467 CLEC4AQ9UMR7 237 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 PFASO15067 1338 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 GSAPA4D1B5 854 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 KLRF2D3W0D1 207 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 STX16-NPEPL1H3BU86 382 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 STX16O14662 325 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 KCNQ3O43525 872 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 NDUFS3O75489 264 aa7.45□□□□□ -1.22
CTNND1-216ENST00000527467 CNPP09543 421 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms