RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 CYP1A2P05177 515 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 FYNP06241 537 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 RALAP11233 206 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 RRM1P23921 792 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 MAGEA1P43355 309 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 GPC5P78333 572 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 CBX2Q14781 532 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-205ENST00000526954 TAF5Q15542 800 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 PUS10Q3MIT2 529 aaKnown RBP17.31■□□□□ 0.36
CAPN1-205ENST00000526954 ARHGAP15Q53QZ3 475 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 HECTD3Q5T447 861 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 FAM102AQ5T9C2 384 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-205ENST00000526954 ITFG1Q8TB96 612 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 FAM149B1Q96BN6 582 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 ZNF653Q96CK0 615 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 SLC2A13Q96QE2 648 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 CDK5RAP1Q96SZ6 601 aaKnown RBP17.31■□□□□ 0.36
CAPN1-205ENST00000526954 POMKQ9H5K3 350 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 TASP1Q9H6P5 420 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 POPDC2Q9HBU9 364 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 PARVAQ9NVD7 372 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 CNOT8Q9UFF9 292 aaKnown RBP17.31■□□□□ 0.36
CAPN1-205ENST00000526954 PCDHA13Q9Y5I0 950 aa17.31■□□□□ 0.36
CAPN1-205ENST00000526954 GOLGA8SH3BPF8 625 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 TMEM253P0C7T8 217 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 RARGP13631 454 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 GJA1P17302 382 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 CEBPBP17676 345 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 KRT83P78385 493 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 CYP4F8P98187 520 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 TEAD2Q15562 447 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 PPP1R15BQ5SWA1 713 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 BTBD8Q5XKL5 378 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 TXNDC8Q6A555 127 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 DNAJC24Q6P3W2 148 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 KLHDC10Q6PID8 442 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 TADA2BQ86TJ2 420 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-205ENST00000526954 SELENOOQ9BVL4 669 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 PACSIN1Q9BY11 444 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 THAP2Q9H0W7 228 aa17.3■□□□□ 0.36
CAPN1-205ENST00000526954 LUC7LQ9NQ29 371 aaKnown RBP17.3■□□□□ 0.36
CAPN1-205ENST00000526954 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.3■□□□□ 0.36
CAPN1-205ENST00000526954 REXO2Q9Y3B8 237 aaKnown RBP17.3■□□□□ 0.36
CAPN1-205ENST00000526954 NUP210Q8TEM1 1887 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-205ENST00000526954 TLR5O60602 858 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 DAB1O75553 588 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 OLFM2O95897 454 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 ABL1P00519 1130 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 KRT3P12035 628 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 ABCB4P21439 1286 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 WEE1P30291 646 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 MAMLD1Q13495 774 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 SMAD2Q15796 467 aaKnown RBP17.29■□□□□ 0.36
CAPN1-205ENST00000526954 GPR158Q5T848 1215 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 MSANTD2Q6P1R3 559 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 PHLDB2Q86SQ0 1253 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 CTNNBL1Q8WYA6 563 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-205ENST00000526954 FGF13Q92913 245 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 SLC46A2Q9BY10 475 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 KCNF1Q9H3M0 494 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 CCSER2Q9H7U1 834 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 MRPL47Q9HD33 250 aaKnown RBP17.29■□□□□ 0.36
CAPN1-205ENST00000526954 METTL5Q9NRN9 209 aaKnown RBP17.29■□□□□ 0.36
CAPN1-205ENST00000526954 OLA1Q9NTK5 396 aaKnown RBP17.29■□□□□ 0.36
CAPN1-205ENST00000526954 GDE1Q9NZC3 331 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 ZFP37Q9Y6Q3 630 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-205ENST00000526954 SCINQ9Y6U3 715 aa17.29■□□□□ 0.36
CAPN1-205ENST00000526954 HELZP42694 1942 aaKnown RBP17.29■□□□□ 0.36
CAPN1-205ENST00000526954 PRUNE2Q8WUY3 3088 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 C2orf78A6NCI8 922 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 ATMINO43313 823 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-205ENST00000526954 GRAP2O75791 330 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 NOS2P35228 1153 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 MATKP42679 507 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 TCEAL1Q15170 157 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 STXBP5Q5T5C0 1151 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 POTEHQ6S545 545 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 NPAS3Q8IXF0 933 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 DEFB106AQ8N104 65 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 MAB21L3Q8N8X9 362 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 ACRBPQ8NEB7 543 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 RNF139Q8WU17 664 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 ING5Q8WYH8 240 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 EDEM1Q92611 657 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 NT5C3BQ969T7 300 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 DDX23Q9BUQ8 820 aaKnown RBP17.28■□□□□ 0.36
CAPN1-205ENST00000526954 RNF38Q9H0F5 515 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 RRN3Q9NYV6 651 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.28■□□□□ 0.36
CAPN1-205ENST00000526954 CDH7Q9ULB5 785 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 NAALADL1Q9UQQ1 740 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 FAM50BQ9Y247 325 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 USTQ9Y2C2 406 aa17.28■□□□□ 0.36
CAPN1-205ENST00000526954 TRAV19A0A0A6YYK7 116 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 C2CD4BA6NLJ0 364 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 CAPN9O14815 690 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 COCHO43405 550 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 NCAM1P13591 858 aa17.27■□□□□ 0.36
CAPN1-205ENST00000526954 HDCP19113 662 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms