RNA–Protein interactions for RNA: ENST00000526942.5

RPUSD4-203, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 1,791 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-203ENST00000526942 ZC2HC1CQ53FD0 456 aaPredicted RBP12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 LPCAT2Q7L5N7 544 aa12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 TTC30AQ86WT1 665 aa12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 SYT12Q8IV01 421 aa12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 ARL14EPQ8N8R7 260 aaPredicted RBP12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 ZNF507Q8TCN5 953 aa12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 RLN3Q8WXF3 142 aa12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 CDK5RAP3Q96JB5 506 aa12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 FNBP1Q96RU3 617 aa12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 TRIM9Q9C026 710 aa12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 YY1AP1Q9H869 796 aa12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 ABCB6Q9NP58 842 aa12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 TMEM74BQ9NUR3 256 aa12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 ASCC3Q8N3C0 2202 aaKnown RBP12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 TNRC6BQ9UPQ9 1833 aaKnown RBP12.39□□□□□ -0.43
RPUSD4-203ENST00000526942 PTPRDP23468 1912 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 C2orf78A6NCI8 922 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 ANKRD63C9JTQ0 380 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 MYO1CO00159 1063 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 ALDH1A2O94788 518 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 SEC31AO94979 1220 aaKnown RBP12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 CYP2F1P24903 491 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 PTGER3P43115 390 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 UBXN1Q04323 297 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 SEMA3BQ13214 749 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 TMEFF1Q8IYR6 380 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 MYCT1Q8N699 235 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 LRRC15Q8TF66 581 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 SPACA7Q96KW9 195 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 ZNF560Q96MR9 790 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 FUT8Q9BYC5 575 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 ARHGAP26Q9UNA1 814 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 LAMA5O15230 3695 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 ATXN2Q99700 1313 aaKnown RBP12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 TRIM49BA6NDI0 452 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 UPK3BL1B0FP48 263 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 TISP43B9A030 160 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 UPK3BL2E5RIL1 263 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 H0Y626 953 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 FAM13AO94988 1023 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 TRIM16O95361 564 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 KRT9P35527 623 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 TNNT3P45378 269 aaPredicted RBP12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 ZNF131P52739 623 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 PMS1P54277 932 aaKnown RBP12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 MRPS21P82921 87 aaKnown RBP12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 BRD3Q15059 726 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 CCDC142Q17RM4 750 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 INTS6LQ5JSJ4 861 aaKnown RBP12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 SLC23A3Q6PIS1 610 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 GPBP1Q86WP2 473 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 FAM114A1Q8IWE2 563 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 FRMD1Q8N878 549 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 WHAMMQ8TF30 809 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 GOLGA1Q92805 767 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 FIZ1Q96SL8 496 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 DNAJC7Q99615 494 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 PKMYT1Q99640 499 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 ACBD6Q9BR61 282 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 PARVGQ9HBI0 331 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 LZTFL1Q9NQ48 299 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 DDX43Q9NXZ2 648 aaKnown RBP12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 MAGEC2Q9UBF1 373 aaPredicted RBP12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 STK17AQ9UEE5 414 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 MBD1Q9UIS9 605 aaPredicted RBP12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 L1RE1Q9UN81 338 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 MAPK8IP1Q9UQF2 711 aa12.38□□□□□ -0.43
RPUSD4-203ENST00000526942 FAM221BA6H8Z2 402 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 MAP2K7O14733 419 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 MAP3K13O43283 966 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 IVLP07476 585 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 ACAT1P24752 427 aaKnown RBP12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 DPP6P42658 865 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 NOP2P46087 812 aaKnown RBP12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 GTF2BQ00403 316 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 PEAR1Q5VY43 1037 aaPredicted RBP12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 LYSMD4Q5XG99 296 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 LMBRD2Q68DH5 695 aaPredicted RBP12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 PROSER1Q86XN7 944 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 ALLCQ8N6M5 410 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 CEP112Q8N8E3 955 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 IL17RCQ8NAC3 791 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 TXNDC5Q8NBS9 432 aaKnown RBP12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 OR8K1Q8NGG5 319 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 CALML4Q96GE6 196 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 DUSP9Q99956 384 aaKnown RBP12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 NUP58Q9BVL2 599 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 EXOC1Q9NV70 894 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 RSPH14Q9UHP6 348 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 CDC23Q9UJX2 597 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 AGO2Q9UKV8 859 aaKnown RBP12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 CAPN11Q9UMQ6 739 aa12.37□□□□□ -0.43
RPUSD4-203ENST00000526942 CCDC151A5D8V7 595 aa12.36□□□□□ -0.43
RPUSD4-203ENST00000526942 RNF225M0QZC1 329 aaPredicted RBP12.36□□□□□ -0.43
RPUSD4-203ENST00000526942 SGK1O00141 431 aa12.36□□□□□ -0.43
RPUSD4-203ENST00000526942 KLF8O95600 359 aaPredicted RBP12.36□□□□□ -0.43
RPUSD4-203ENST00000526942 CAPNS1P04632 268 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms