RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 CYP2C9P11712 490 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 BRAFP15056 766 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 ARL1P40616 181 aaPredicted RBP10.25□□□□□ -0.77
USP35-201ENST00000526425 NUMBP49757 651 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 BEX3Q00994 111 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 RGMBQ6NW40 437 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 NSRP1Q9H0G5 558 aaKnown RBP10.25□□□□□ -0.77
USP35-201ENST00000526425 SNX25Q9H3E2 840 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 PRMT7Q9NVM4 692 aaPredicted RBP10.25□□□□□ -0.77
USP35-201ENST00000526425 CARD8Q9Y2G2 431 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 ZC3H11AO75152 810 aaKnown RBP eCLIP10.25□□□□□ -0.77
USP35-201ENST00000526425 ITGA2BP08514 1039 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 HSPA8P11142 646 aaKnown RBP10.25□□□□□ -0.77
USP35-201ENST00000526425 EDNRBP24530 442 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 STIP1P31948 543 aaKnown RBP10.25□□□□□ -0.77
USP35-201ENST00000526425 EIF2B2P49770 351 aaKnown RBP10.25□□□□□ -0.77
USP35-201ENST00000526425 EIF3BP55884 814 aaKnown RBP10.25□□□□□ -0.77
USP35-201ENST00000526425 C6orf118Q5T5N4 469 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 UBAP2Q5T6F2 1119 aaKnown RBP10.25□□□□□ -0.77
USP35-201ENST00000526425 DUPD1Q68J44 220 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 EXOC3L1Q86VI1 746 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 C4orf33Q8N1A6 199 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 RASGEF1CQ8N431 466 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 RUBCNQ92622 972 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 STMN2Q93045 179 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 RNF34Q969K3 372 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 TINF2Q9BSI4 451 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 MROH7Q68CQ1 1323 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 ATXN2Q99700 1313 aaKnown RBP10.25□□□□□ -0.77
USP35-201ENST00000526425 DOCK1Q14185 1865 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 TMEM221A6NGB7 291 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 RASA4BC9J798 803 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 MCF2LO15068 1137 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 RASA4O43374 803 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 SLC1A1P43005 524 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 NDST1P52848 882 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 TNFAIP2Q03169 654 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 PAN2Q504Q3 1202 aaKnown RBP10.25□□□□□ -0.77
USP35-201ENST00000526425 TXNRD3NBQ6F5E7 133 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 NME8Q8N427 588 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 JOSD2Q8TAC2 188 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 CFAP36Q96G28 342 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 SPC25Q9HBM1 224 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 INPP5FQ9Y2H2 1132 aa10.25□□□□□ -0.77
USP35-201ENST00000526425 GAS2O43903 313 aaKnown RBP10.24□□□□□ -0.77
USP35-201ENST00000526425 C6orf222P0C671 652 aaPredicted RBP10.24□□□□□ -0.77
USP35-201ENST00000526425 SREBF2Q12772 1141 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 DUS1LQ6P1R4 473 aaKnown RBP10.24□□□□□ -0.77
USP35-201ENST00000526425 ZPBP2Q6X784 338 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 FAM71DQ8N9W8 422 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 CATSPER2Q96P56 530 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 DCLK3Q9C098 648 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 LRRC4CQ9HCJ2 640 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 DPP3Q9NY33 737 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 SELENONQ9NZV5 590 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 HMGXB4Q9UGU5 601 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 BRCA1P38398 1863 aaKnown RBP10.24□□□□□ -0.77
USP35-201ENST00000526425 A0A0J9YVX5 310 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 CAPN9O14815 690 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 MAPK13O15264 365 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 ASS1P00966 412 aaKnown RBP10.24□□□□□ -0.77
USP35-201ENST00000526425 RXRGP48443 463 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 ACVR2BQ13705 512 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 DGKDQ16760 1214 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 C15orf59Q2T9L4 293 aaPredicted RBP10.24□□□□□ -0.77
USP35-201ENST00000526425 FOXB2Q5VYV0 432 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 ZNF677Q86XU0 584 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 CCNYQ8ND76 341 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 RAB3IL1Q8TBN0 382 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 PYROXD1Q8WU10 500 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 DNAJB3Q8WWF6 145 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 MS4A4AQ96JQ5 239 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 LPIN3Q9BQK8 851 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 DHX35Q9H5Z1 703 aaKnown RBP10.24□□□□□ -0.77
USP35-201ENST00000526425 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.24□□□□□ -0.77
USP35-201ENST00000526425 COQ4Q9Y3A0 265 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 TRIM17Q9Y577 477 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 CES2O00748 559 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 ARF4P18085 180 aaPredicted RBP10.24□□□□□ -0.77
USP35-201ENST00000526425 IL4RP24394 825 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 PCYT1AP49585 367 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 RTP1P59025 263 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 EIF3EP60228 445 aaKnown RBP10.24□□□□□ -0.77
USP35-201ENST00000526425 NCALDP61601 193 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 IRX4P78413 519 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 PTPN11Q06124 597 aaPredicted RBP10.24□□□□□ -0.77
USP35-201ENST00000526425 ZNF268Q14587 947 aaPredicted RBP10.24□□□□□ -0.77
USP35-201ENST00000526425 GRIK4Q16099 956 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 GOLGA7BQ2TAP0 167 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 ZNF354CQ86Y25 554 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 ACTL9Q8TC94 416 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 FGFR1OP2Q9NVK5 253 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 NEU2Q9Y3R4 380 aa10.24□□□□□ -0.77
USP35-201ENST00000526425 MAGEB2O15479 319 aa10.23□□□□□ -0.77
USP35-201ENST00000526425 MSCO60682 206 aa10.23□□□□□ -0.77
USP35-201ENST00000526425 PGM3O95394 542 aa10.23□□□□□ -0.77
USP35-201ENST00000526425 CA4P22748 312 aa10.23□□□□□ -0.77
USP35-201ENST00000526425 MAN1A1P33908 653 aa10.23□□□□□ -0.77
USP35-201ENST00000526425 NRLP54845 237 aa10.23□□□□□ -0.77
USP35-201ENST00000526425 COPS2P61201 443 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms