RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 DENND1BQ6P3S1 775 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 NUDT18Q6ZVK8 323 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 HFE2Q6ZVN8 426 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 RALGPS2Q86X27 583 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 MIB1Q86YT6 1006 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZDHHC17Q8IUH5 632 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZNF276Q8N554 614 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 C1orf131Q8NDD1 294 aaKnown RBP5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC35F5Q8WV83 523 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 FAM3CQ92520 227 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 OTUB2Q96DC9 234 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 RSPRY1Q96DX4 576 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 ASIC4Q96FT7 647 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZFYVE19Q96K21 471 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 PPP1R13BQ96KQ4 1090 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC22A12Q96S37 553 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 PRRX2Q99811 253 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 LRFN3Q9BTN0 628 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 NUP58Q9BVL2 599 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 NAA15Q9BXJ9 866 aaKnown RBP5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 DCLK3Q9C098 648 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 NUCKS1Q9H1E3 243 aaKnown RBP5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 LHX5Q9H2C1 402 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 HSD3B7Q9H2F3 369 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 EBF3Q9H4W6 596 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 RTN4Q9NQC3 1192 aaKnown RBP5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 HEBP1Q9NRV9 189 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 MARCH2Q9P0N8 246 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 AJAP1Q9UKB5 411 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 MYO6Q9UM54 1294 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZNF510Q9Y2H8 683 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 SIT1Q9Y3P8 196 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 HBS1LQ9Y450 684 aaKnown RBP5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 WNT6Q9Y6F9 365 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 EYSQ5T1H1 3165 aa5.66□□□□□ -1.5
HMGB1P40-201ENST00000525121 A0A1B0GTH6 734 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC12A8A0AV02 714 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 TYW5A2RUC4 315 aaKnown RBP5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 KRBA1A5PL33 1030 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 ANKRD62A6NC57 917 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 FAM170BA6NMN3 283 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 YJEFN3A6XGL0 299 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 E5RJQ4 531 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 E7ENQ6 273 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 SPECC1L-ADORA2AF8WAN1 911 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 HSF2BPO75031 334 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 CALCAP01258 141 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 CYBBP04839 570 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 GLI1P08151 1106 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 HMBSP08397 361 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 ADH5P11766 374 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 NCAM1P13591 858 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 ARSAP15289 507 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 DESP17661 470 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 AOC1P19801 751 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 GBP1P32455 592 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 CTHP32929 405 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 CLCN1P35523 988 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 CHKAP35790 457 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 GPD2P43304 727 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 NSFP46459 744 aaKnown RBP5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 SLC11A2P49281 568 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 NUBP1P53384 320 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 JAM2P57087 298 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 STARD6P59095 220 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZNF445P59923 1031 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 YWHAZP63104 245 aaKnown RBP5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 CDR2Q01850 454 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 TNK2Q07912 1038 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 GRSF1Q12849 480 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 MTA1Q13330 715 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 TRIM14Q14142 442 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 PPP2R5DQ14738 602 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 ASIC2Q16515 512 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 TSR1Q2NL82 804 aaKnown RBP5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 EFHC1Q5JVL4 640 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 SFMBT2Q5VUG0 894 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 NUGGCQ68CJ6 796 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 TRIM68Q6AZZ1 485 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 OR6B2Q6IFH4 312 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 APTXQ7Z2E3 356 aaKnown RBP5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 SCD5Q86SK9 330 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 NOP9Q86U38 636 aaKnown RBP5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 VPS36Q86VN1 386 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 ERICH1Q86X53 443 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 SCUBE3Q8IX30 993 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 RNF214Q8ND24 703 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 PJA1Q8NG27 643 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 CCDC26Q8TAB7 109 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 TTC8Q8TAM2 541 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 EPS8L1Q8TE68 723 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 EDEM1Q92611 657 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 PLD4Q96BZ4 506 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 SERPINB11Q96P15 392 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 DDX50Q9BQ39 737 aaKnown RBP5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 FAM83CQ9BQN1 747 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 ZSWIM1Q9BR11 485 aa5.65□□□□□ -1.5
HMGB1P40-201ENST00000525121 IER2Q9BTL4 223 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms