RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 SCAND2PQ9GZW5 306 aaPredicted RBP12.48□□□□□ -0.41
CLNS1A-202ENST00000525064 TMEM8AQ9HCN3 771 aa12.48□□□□□ -0.41
CLNS1A-202ENST00000525064 SPHK2Q9NRA0 654 aa12.48□□□□□ -0.41
CLNS1A-202ENST00000525064 TBC1D14Q9P2M4 693 aa12.48□□□□□ -0.41
CLNS1A-202ENST00000525064 SCML2Q9UQR0 700 aa12.48□□□□□ -0.41
CLNS1A-202ENST00000525064 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
CLNS1A-202ENST00000525064 TPRP12270 2363 aaKnown RBP12.48□□□□□ -0.41
CLNS1A-202ENST00000525064 TULP3O75386 442 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 KIF20AO95235 890 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 ADRB1P08588 477 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 KRT13P13646 458 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 ACO1P21399 889 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 GBP1P32455 592 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 CREB5Q02930 508 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 SCD5Q86SK9 330 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 MIB1Q86YT6 1006 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 FRMD1Q8N878 549 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 C12orf50Q8NA57 414 aaPredicted RBP12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 OTUB2Q96DC9 234 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 CNTNAP3BQ96NU0 1288 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 NT5C1AQ9BXI3 368 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 CNTNAP3Q9BZ76 1288 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 IMPG2Q9BZV3 1241 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 NACA2Q9H009 215 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 FBXO44Q9H4M3 255 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 CYP3A43Q9HB55 503 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 TLR8Q9NR97 1041 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 PCDHGA5Q9Y5G8 931 aa12.47□□□□□ -0.41
CLNS1A-202ENST00000525064 ASCC3Q8N3C0 2202 aaKnown RBP12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 A0A0A0MRY4 1105 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 BCLAF3A2AJT9 711 aaKnown RBP12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 TM4SF5O14894 197 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 RHOBTB1O94844 696 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 RARGP13631 454 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 GRIA2P42262 883 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 PRCPP42785 496 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 MXI1P50539 228 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 LIMK1P53667 647 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 PMS1P54277 932 aaKnown RBP12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 MCCD1P59942 119 aaPredicted RBP12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 ELF2Q15723 593 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 ANO4Q32M45 955 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 EDRF1Q3B7T1 1238 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 CBWD6Q4V339 395 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 CBWD3Q5JTY5 395 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 CBWD5Q5RIA9 395 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 STPG1Q5TH74 334 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 KRT39Q6A163 491 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 FMR1NBQ8N0W7 255 aaPredicted RBP12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 TERB1Q8NA31 727 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 OLIG1Q8TAK6 271 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 TATDN2Q93075 761 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 ERLEC1Q96DZ1 483 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 DUSP9Q99956 384 aaKnown RBP12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 CYLDQ9NQC7 956 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 VPS45Q9NRW7 570 aa12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.46□□□□□ -0.41
CLNS1A-202ENST00000525064 CKAP5Q14008 2032 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 TCRBV21S2A2A0A5A6 115 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 TRIM49BA6NDI0 452 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 PATE3B3GLJ2 98 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 NEDD8-MDP1E9PL57 170 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 RPL13P26373 211 aaKnown RBP12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 ATP5C1P36542 298 aaKnown RBP12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 P2RY2P41231 377 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 WASP42768 502 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 TNFRSF4P43489 277 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 KIF11P52732 1056 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 ENPEPQ07075 957 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 USP39Q53GS9 565 aaKnown RBP12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 C10orf76Q5T2E6 689 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 EGFLAMQ63HQ2 1017 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 Q6ZNB5 142 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 TPGS1Q6ZTW0 290 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 TOGARAM2Q6ZUX3 1019 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 HTR3DQ70Z44 454 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 SLC4A11Q8NBS3 891 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 CCDC26Q8TAB7 109 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 HMGB4Q8WW32 186 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 EDEM2Q9BV94 578 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 DUSP16Q9BY84 665 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 PNPLA8Q9NP80 782 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 CISHQ9NSE2 258 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 DNAJC17Q9NVM6 304 aaKnown RBP12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 MBD1Q9UIS9 605 aaPredicted RBP12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 PCDHA5Q9Y5H7 936 aa12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 MAP1BP46821 2468 aaKnown RBP12.45□□□□□ -0.42
CLNS1A-202ENST00000525064 PCDH15Q96QU1 1955 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 TBC1D3BA6NDS4 549 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 PRRT4C9JH25 899 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 TULP2O00295 520 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 FOXD2O60548 495 aaPredicted RBP12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 STC2O76061 302 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 CAVIN2O95810 425 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 EPB41P11171 864 aaKnown RBP12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 TYRP14679 529 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 GTF2H1P32780 548 aa12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 DHPSP49366 369 aaPredicted RBP12.44□□□□□ -0.42
CLNS1A-202ENST00000525064 RAD23BP54727 409 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms