RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 UBXN6Q9BZV1 441 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 RAB17Q9H0T7 212 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 MED4Q9NPJ6 270 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 GDF3Q9NR23 364 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 MAN1C1Q9NR34 630 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 ZNF446Q9NWS9 450 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 PCYOX1Q9UHG3 505 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 IP6K2Q9UHH9 426 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 FEZ2Q9UHY8 353 aaPredicted RBP7.44□□□□□ -1.22
VPS11-201ENST00000524454 ANAPC7Q9UJX3 599 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.44□□□□□ -1.22
VPS11-201ENST00000524454 EFR3BQ9Y2G0 817 aa7.44□□□□□ -1.22
VPS11-201ENST00000524454 SF3B1O75533 1304 aaKnown RBP eCLIP7.44□□□□□ -1.22
VPS11-201ENST00000524454 ARHGEF37A1IGU5 675 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 TMEM191CA6NGB0 347 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 O00370 1275 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 PIRO00625 290 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 NDC80O14777 642 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 CEP104O60308 925 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 PHF2O75151 1096 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 RFPL2O75678 378 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 ERBB2P04626 1255 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 RHOXF2BP0C7M4 288 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 SRGAP2BP0DMP2 458 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 COMTP21964 271 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 RRM1P23921 792 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 CXCR5P32302 372 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 CDR1P51861 262 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 RAD23BP54727 409 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 PSMD5Q16401 504 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 USP41Q3LFD5 358 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 SV2CQ496J9 727 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 SGO2Q562F6 1265 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 DCAF12L1Q5VU92 463 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 ARHGAP17Q68EM7 881 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 SCARA3Q6AZY7 606 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 LCLAT1Q6UWP7 414 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 TMEM184AQ6ZMB5 413 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 ADHFE1Q8IWW8 467 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 TOP6BLQ8N6T0 577 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 SLC4A11Q8NBS3 891 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 C1orf131Q8NDD1 294 aaKnown RBP7.43□□□□□ -1.22
VPS11-201ENST00000524454 EXD1Q8NHP7 514 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 PRR7Q8TB68 274 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 ALG3Q92685 438 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 CYFIP2Q96F07 1278 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 RBM41Q96IZ5 413 aaKnown RBP7.43□□□□□ -1.22
VPS11-201ENST00000524454 RHOXF2Q9BQY4 288 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 TTPALQ9BTX7 342 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 NT5C1AQ9BXI3 368 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 POMKQ9H5K3 350 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 EPHX3Q9H6B9 360 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 FAM114A2Q9NRY5 505 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 CHST7Q9NS84 486 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 DDX56Q9NY93 547 aaKnown RBP7.43□□□□□ -1.22
VPS11-201ENST00000524454 RASAL2Q9UJF2 1139 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 AGAP1Q9UPQ3 857 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 IRAK3Q9Y616 596 aa7.43□□□□□ -1.22
VPS11-201ENST00000524454 SCN1AP35498 2009 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 DOCK6Q96HP0 2047 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 A0A0C4DFX4 3053 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 CARNS1A5YM72 827 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 SIGLEC16A6NMB1 481 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 ZNF487B1APH4 448 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 SART1O43290 800 aaKnown RBP7.42□□□□□ -1.22
VPS11-201ENST00000524454 TGM5O43548 720 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 HEXIM1O94992 359 aaKnown RBP7.42□□□□□ -1.22
VPS11-201ENST00000524454 GLUD1P00367 558 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 FGGP02679 453 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 KRT19P08727 400 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 JUNDP17535 347 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 DESP17661 470 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 RPL9P32969 192 aaKnown RBP7.42□□□□□ -1.22
VPS11-201ENST00000524454 RPL34P49207 117 aaKnown RBP7.42□□□□□ -1.22
VPS11-201ENST00000524454 ARPP19P56211 112 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 C2orf54Q08AI8 447 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 MESDQ14696 234 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 CBX2Q14781 532 aaPredicted RBP7.42□□□□□ -1.22
VPS11-201ENST00000524454 C9orf57Q5W0N0 161 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 DNAJC24Q6P3W2 148 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 DRICH1Q6PGQ1 229 aaPredicted RBP7.42□□□□□ -1.22
VPS11-201ENST00000524454 DCLRE1AQ6PJP8 1040 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 RSPO2Q6UXX9 243 aaPredicted RBP7.42□□□□□ -1.22
VPS11-201ENST00000524454 ERICH1Q86X53 443 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 CRYBG2Q8N1P7 616 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 TMEM86AQ8N2M4 240 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 GOLGA6L1Q8N7Z2 621 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 ST13P5Q8NFI4 369 aaPredicted RBP7.42□□□□□ -1.22
VPS11-201ENST00000524454 IPO4Q8TEX9 1081 aaKnown RBP7.42□□□□□ -1.22
VPS11-201ENST00000524454 GRK7Q8WTQ7 553 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 SUSD6Q92537 303 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 MCRS1Q96EZ8 462 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 UROC1Q96N76 676 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 PSMB7Q99436 277 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 CLSTN3Q9BQT9 956 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 LRRC1Q9BTT6 524 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 TSPYL1Q9H0U9 437 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 LRRC19Q9H756 370 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 RXFP1Q9HBX9 757 aa7.42□□□□□ -1.22
VPS11-201ENST00000524454 ACP6Q9NPH0 428 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms