RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 TISP43B9A030 160 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 EYA2O00167 538 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 TAF5LO75529 589 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 KRT38O76015 456 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 NTSR2O95665 410 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 RXRAP19793 462 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 SLC5A2P31639 672 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 ADRA1BP35368 520 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 MTHFSP49914 203 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 GATMP50440 423 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 VAV2P52735 878 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 ADCK5Q3MIX3 580 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 SFRP4Q6FHJ7 346 aaPredicted RBP6.7□□□□□ -1.34
SKP1-213ENST00000524288 FAM109AQ8N4B1 249 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 ASB12Q8WXK4 309 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 C3orf49Q96BT1 292 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 TRAPPC9Q96Q05 1148 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 HAPLN3Q96S86 360 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 ADAM2Q99965 735 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 PYM1Q9BRP8 204 aaKnown RBP6.7□□□□□ -1.34
SKP1-213ENST00000524288 AMBRA1Q9C0C7 1298 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 BRD8Q9H0E9 1235 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 ELAC1Q9H777 363 aaKnown RBP6.7□□□□□ -1.34
SKP1-213ENST00000524288 SEPSECSQ9HD40 501 aaKnown RBP6.7□□□□□ -1.34
SKP1-213ENST00000524288 SAYSD1Q9NPB0 183 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 RIMKLBQ9ULI2 386 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 CA14Q9ULX7 337 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 USP22Q9UPT9 525 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 CRYL1Q9Y2S2 319 aa6.7□□□□□ -1.34
SKP1-213ENST00000524288 GRID2IPA4D2P6 1211 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 TMEM200CA6NKL6 621 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 MARCH11A6NNE9 402 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 H0Y3Z8 333 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 SNX2O60749 519 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 CDKL5O76039 1030 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 RHOP08100 348 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 PROZP22891 400 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 ZFP36P26651 326 aaKnown RBP6.69□□□□□ -1.34
SKP1-213ENST00000524288 CST5P28325 142 aaPredicted RBP6.69□□□□□ -1.34
SKP1-213ENST00000524288 RBL1P28749 1068 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 ADD2P35612 726 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 CLCN2P51788 898 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 FBXO47Q5MNV8 452 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 ATPAF1Q5TC12 328 aaPredicted RBP6.69□□□□□ -1.34
SKP1-213ENST00000524288 METTL25Q8N6Q8 603 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 B3GALNT2Q8NCR0 500 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 ABHD5Q8WTS1 349 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 LPIN2Q92539 896 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 MCRS1Q96EZ8 462 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 MPP4Q96JB8 637 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 ZNF668Q96K58 619 aaPredicted RBP6.69□□□□□ -1.34
SKP1-213ENST00000524288 TBATAQ96M53 351 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 OSBPL9Q96SU4 736 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 TOR3AQ9H497 397 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 GALNT9Q9HCQ5 603 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 RIC8AQ9NPQ8 531 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 INTS13Q9NVM9 706 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 DAPP1Q9UN19 280 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 SLC27A6Q9Y2P4 619 aa6.69□□□□□ -1.34
SKP1-213ENST00000524288 COL4A3Q01955 1670 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 OR2W5A6NFC9 320 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 KIF28PB7ZC32 967 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 LPXNO60711 386 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 EIF5BO60841 1220 aaKnown RBP6.68□□□□□ -1.34
SKP1-213ENST00000524288 RPP40O75818 363 aaKnown RBP6.68□□□□□ -1.34
SKP1-213ENST00000524288 DDX6P26196 483 aaKnown RBP eCLIP6.68□□□□□ -1.34
SKP1-213ENST00000524288 HTR7P34969 479 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 BMPR1AP36894 532 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 RPS6KA2Q15349 733 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 TRIM71Q2Q1W2 868 aaKnown RBP6.68□□□□□ -1.34
SKP1-213ENST00000524288 BEAN1Q3B7T3 259 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 DPY19L3Q6ZPD9 716 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 LRRTM4Q86VH4 590 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 VRK3Q8IV63 474 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 ARHGEF19Q8IW93 802 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 COLGALT2Q8IYK4 626 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 IZUMO1Q8IYV9 350 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 NRSN1Q8IZ57 195 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 SIMC1Q8NDZ2 872 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 MBD3L2Q8NHZ7 208 aaPredicted RBP6.68□□□□□ -1.34
SKP1-213ENST00000524288 SSH3Q8TE77 659 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 GOLGA1Q92805 767 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 GLG1Q92896 1179 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 USP13Q92995 863 aaPredicted RBP6.68□□□□□ -1.34
SKP1-213ENST00000524288 COG8Q96MW5 612 aa6.68□□□□□ -1.34
SKP1-213ENST00000524288 CENPVL1A0A0U1RR11 272 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 FAM155BO75949 473 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 CER1O95813 267 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 TNFAIP3P21580 790 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 DRD1P21728 446 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 EPHA3P29320 983 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 PBX1P40424 430 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 SEC24CP53992 1094 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 G3BP1Q13283 466 aaKnown RBP eCLIP6.67□□□□□ -1.34
SKP1-213ENST00000524288 TP53BP2Q13625 1128 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 SF3B3Q15393 1217 aaKnown RBP6.67□□□□□ -1.34
SKP1-213ENST00000524288 FAM110CQ1W6H9 321 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 MAVSQ7Z434 540 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 HEATR4Q86WZ0 1026 aa6.67□□□□□ -1.34
SKP1-213ENST00000524288 CPOQ8IVL8 374 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms