RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 NOP14P78316 857 aaKnown RBP12.35□□□□□ -0.43
SDCBP-211ENST00000523441 PREPLQ4J6C6 727 aaPredicted RBP12.35□□□□□ -0.43
SDCBP-211ENST00000523441 HECTD3Q5T447 861 aa12.35□□□□□ -0.43
SDCBP-211ENST00000523441 DHRS13Q6UX07 377 aa12.35□□□□□ -0.43
SDCBP-211ENST00000523441 LAYNQ6UX15 382 aa12.35□□□□□ -0.43
SDCBP-211ENST00000523441 ZNF605Q86T29 641 aa12.35□□□□□ -0.43
SDCBP-211ENST00000523441 SCAMP5Q8TAC9 235 aa12.35□□□□□ -0.43
SDCBP-211ENST00000523441 CXorf38Q8TB03 319 aa12.35□□□□□ -0.43
SDCBP-211ENST00000523441 ZFRQ96KR1 1074 aaKnown RBP12.35□□□□□ -0.43
SDCBP-211ENST00000523441 XPO6Q96QU8 1125 aaKnown RBP12.35□□□□□ -0.43
SDCBP-211ENST00000523441 UBL7Q96S82 380 aaPredicted RBP12.35□□□□□ -0.43
SDCBP-211ENST00000523441 KCNK16Q96T55 309 aa12.35□□□□□ -0.43
SDCBP-211ENST00000523441 TOR4AQ9NXH8 423 aa12.35□□□□□ -0.43
SDCBP-211ENST00000523441 GMIPQ9P107 970 aa12.35□□□□□ -0.43
SDCBP-211ENST00000523441 EXOC7Q9UPT5 735 aa12.35□□□□□ -0.43
SDCBP-211ENST00000523441 NME7Q9Y5B8 376 aa12.35□□□□□ -0.43
SDCBP-211ENST00000523441 KCNJ18B7U540 433 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 H3BQV1 296 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 PYCARD-AS1I3L0S3 204 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 BCAT2O15382 392 aaPredicted RBP12.34□□□□□ -0.43
SDCBP-211ENST00000523441 HOXC11O43248 304 aaPredicted RBP12.34□□□□□ -0.43
SDCBP-211ENST00000523441 PRPF6O94906 941 aaKnown RBP12.34□□□□□ -0.43
SDCBP-211ENST00000523441 IDEP14735 1019 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 PTPN1P18031 435 aaKnown RBP12.34□□□□□ -0.43
SDCBP-211ENST00000523441 ABCD1P33897 745 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 PPP3CCP48454 512 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 CSNK1EP49674 416 aaKnown RBP12.34□□□□□ -0.43
SDCBP-211ENST00000523441 CASP5P51878 434 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 BNC1Q01954 994 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 SEMG2Q02383 582 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 L1TD1Q5T7N2 865 aaKnown RBP12.34□□□□□ -0.43
SDCBP-211ENST00000523441 NUP93Q8N1F7 819 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 KCTD17Q8N5Z5 321 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 KCNN1Q92952 543 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 JAKMIP2Q96AA8 810 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 ELMO3Q96BJ8 720 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 C8orf48Q96LL4 319 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 ARID3AQ99856 593 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 B3GNT5Q9BYG0 378 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 ZDHHC5Q9C0B5 715 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 INTS13Q9NVM9 706 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 SLCO1B1Q9Y6L6 691 aa12.34□□□□□ -0.43
SDCBP-211ENST00000523441 KALRNO60229 2985 aa12.33□□□□□ -0.43
SDCBP-211ENST00000523441 A8MXQ7 604 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 TBX18O95935 607 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 LDHAP00338 332 aaKnown RBP12.33□□□□□ -0.44
SDCBP-211ENST00000523441 PLA2G2AP14555 144 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 WARSP23381 471 aaKnown RBP12.33□□□□□ -0.44
SDCBP-211ENST00000523441 DGKGP49619 791 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 STARD3Q14849 445 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 FUT11Q495W5 492 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 GLRX5Q86SX6 157 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 GALNT15Q8N3T1 639 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 RDH13Q8NBN7 331 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 KCNV2Q8TDN2 545 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 OTUB2Q96DC9 234 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 AK8Q96MA6 479 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 CDC6Q99741 560 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 FGFBP2Q9BYJ0 223 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 ELOVL4Q9GZR5 314 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 WSB2Q9NYS7 404 aaPredicted RBP12.33□□□□□ -0.44
SDCBP-211ENST00000523441 KIAA1522Q9P206 1035 aaPredicted RBP12.33□□□□□ -0.44
SDCBP-211ENST00000523441 NXF1Q9UBU9 619 aaKnown RBP12.33□□□□□ -0.44
SDCBP-211ENST00000523441 RAI2Q9Y5P3 530 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 AK5Q9Y6K8 562 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 STON1Q9Y6Q2 735 aa12.33□□□□□ -0.44
SDCBP-211ENST00000523441 MDM4O15151 490 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 FLRT2O43155 660 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 RTN3O95197 1032 aaPredicted RBP12.32□□□□□ -0.44
SDCBP-211ENST00000523441 DLATP10515 647 aaKnown RBP12.32□□□□□ -0.44
SDCBP-211ENST00000523441 ACADMP11310 421 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 EIF2S3P41091 472 aaKnown RBP12.32□□□□□ -0.44
SDCBP-211ENST00000523441 PGFP49763 221 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 TPMTP51580 245 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 TNNC1P63316 161 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 LARP1BQ659C4 914 aaKnown RBP12.32□□□□□ -0.44
SDCBP-211ENST00000523441 ARL6IP4Q66PJ3 421 aaKnown RBP12.32□□□□□ -0.44
SDCBP-211ENST00000523441 LRRC69Q6ZNQ3 347 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 DPH6Q7L8W6 267 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 CBWD2Q8IUF1 395 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 SCUBE3Q8IX30 993 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 GPD1LQ8N335 351 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 PDCD7Q8N8D1 485 aaKnown RBP12.32□□□□□ -0.44
SDCBP-211ENST00000523441 PDZD8Q8NEN9 1154 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 HVCN1Q96D96 273 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 EPSTI1Q96J88 318 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 ZSCAN31Q96LW9 406 aaPredicted RBP12.32□□□□□ -0.44
SDCBP-211ENST00000523441 FCRL3Q96P31 734 aaPredicted RBP12.32□□□□□ -0.44
SDCBP-211ENST00000523441 GABRG3Q99928 467 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 MKRN2Q9H000 416 aaKnown RBP12.32□□□□□ -0.44
SDCBP-211ENST00000523441 ST6GALNAC4Q9H4F1 302 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 CD248Q9HCU0 757 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 NUDT5Q9UKK9 219 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 SNX11Q9Y5W9 270 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 MYLKQ15746 1914 aa12.32□□□□□ -0.44
SDCBP-211ENST00000523441 NUMA1Q14980 2115 aa12.31□□□□□ -0.44
SDCBP-211ENST00000523441 A0A087WV48 116 aa12.31□□□□□ -0.44
SDCBP-211ENST00000523441 CBX4O00257 560 aa12.31□□□□□ -0.44
SDCBP-211ENST00000523441 SYNCRIPO60506 623 aaKnown RBP12.31□□□□□ -0.44
SDCBP-211ENST00000523441 PPP1R37O75864 691 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms