RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 FAM171A1Q5VUB5 890 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 GTF2IRD2BQ6EKJ0 949 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 PKN3Q6P5Z2 889 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 C19orf48Q6RUI8 117 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 CASC1Q6TDU7 716 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 ANO5Q75V66 913 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 SPATC1Q76KD6 591 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 GTF2IRD2Q86UP8 949 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 CEP57Q86XR8 500 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 GPR65Q8IYL9 337 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 FANCBQ8NB91 859 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 GAB3Q8WWW8 586 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 TMEM143Q96AN5 459 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 CPB2Q96IY4 423 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 MAP6Q96JE9 813 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 ZSWIM3Q96MP5 696 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 BBC3Q96PG8 261 aaPredicted RBP7□□□□□ -1.29
VPS13B-211ENST00000522802 DEPDC7Q96QD5 511 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 TTPALQ9BTX7 342 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 TRMT61BQ9BVS5 477 aaKnown RBP7□□□□□ -1.29
VPS13B-211ENST00000522802 BARHL2Q9NY43 387 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 SNTG2Q9NY99 539 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 GDE1Q9NZC3 331 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 TNFRSF10DQ9UBN6 386 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 ZMYM5Q9UJ78 669 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 KLK13Q9UKR3 277 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 GPR55Q9Y2T6 319 aaPredicted RBP7□□□□□ -1.29
VPS13B-211ENST00000522802 ARID1BQ8NFD5 2236 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-211ENST00000522802 NUP210Q8TEM1 1887 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-211ENST00000522802 MYO16Q9Y6X6 1858 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 WDR27A2RRH5 827 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 C4orf47A7E2U8 309 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 NOTOA8MTQ0 251 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 FADS2P1A8MWK0 482 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 AGRPO00253 132 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 FGF10O15520 208 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-211ENST00000522802 B4GALT5O43286 388 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 GAS7O60861 476 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 ERLIN2O94905 339 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 GSPT1P15170 499 aaKnown RBP6.99□□□□□ -1.29
VPS13B-211ENST00000522802 OR1D2P34982 312 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 KIR2DL1P43626 348 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-211ENST00000522802 KIR2DL2P43627 348 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-211ENST00000522802 JAK3P52333 1124 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 NPEPPSP55786 919 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 CDC42EP1Q00587 391 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 CYP4F3Q08477 520 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 LAMTOR4Q0VGL1 99 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 GRIK3Q13003 919 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 XKR3Q5GH77 459 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 LRCH2Q5VUJ6 765 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 CACNA2D4Q7Z3S7 1137 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 CDR2LQ86X02 465 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-211ENST00000522802 SPPL2CQ8IUH8 684 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 ANKS4BQ8N8V4 417 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 EXOC6Q8TAG9 804 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 PRPF31Q8WWY3 499 aaKnown RBP6.99□□□□□ -1.29
VPS13B-211ENST00000522802 RSPRY1Q96DX4 576 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 LOXL4Q96JB6 756 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 CXCL16Q9H2A7 254 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 ZFP14Q9HCL3 533 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 UBN1Q9NPG3 1134 aa6.99□□□□□ -1.29
VPS13B-211ENST00000522802 POLR3BQ9NW08 1133 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-211ENST00000522802 ASCC3Q8N3C0 2202 aaKnown RBP6.99□□□□□ -1.29
VPS13B-211ENST00000522802 APC2O95996 2303 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 ATG2BQ96BY7 2078 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 FITM1A5D6W6 292 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 TADA2AO75478 443 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 CCDC192P0DO97 292 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 GJA1P17302 382 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 PSMC3P17980 439 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 HOXA6P31267 233 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 HOXC12P31275 282 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 SFNP31947 248 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 CIITAP33076 1130 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 LIFRP42702 1097 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 AFMP43652 599 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 PPP2R2AP63151 447 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 CHRNEQ04844 493 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 LRRC32Q14392 662 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 EEF1DP3Q658K8 133 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 NOTUMQ6P988 496 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 APOA5Q6Q788 366 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 DPH6Q7L8W6 267 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 MIER3Q7Z3K6 550 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 SRGAP1Q7Z6B7 1085 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 CHD1LQ86WJ1 897 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 TEX2Q8IWB9 1127 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 OXR1Q8N573 874 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 RNF149Q8NC42 400 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 CNNM3Q8NE01 707 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 DEFB124Q8NES8 71 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 TTC8Q8TAM2 541 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 BTN2A2Q8WVV5 523 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 PSPC1Q8WXF1 523 aaKnown RBP6.98□□□□□ -1.29
VPS13B-211ENST00000522802 SLC5A5Q92911 643 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 PTCHD1Q96NR3 888 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 SRPK1Q96SB4 655 aaKnown RBP6.98□□□□□ -1.29
VPS13B-211ENST00000522802 RIT2Q99578 217 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 TEKT3Q9BXF9 490 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms