RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 TRIM59Q8IWR1 403 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 SPEM1Q8N4L4 309 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 C12orf29Q8N999 325 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 ANKRD52Q8NB46 1076 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 SH3RF2Q8TEC5 729 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 BAP1Q92560 729 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 SEMA4DQ92854 862 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 LRRC3BQ96PB8 259 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 CYP2S1Q96SQ9 504 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 SMOQ99835 787 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 SRRTQ9BXP5 876 aaKnown RBP10.76□□□□□ -0.69
TRIM35-204ENST00000521283 NACA2Q9H009 215 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 CLSTN2Q9H4D0 955 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 ECT2Q9H8V3 914 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 LMAN1LQ9HAT1 526 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 GTSE1Q9NYZ3 720 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 CLIC5Q9NZA1 410 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 HESX1Q9UBX0 185 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 CTNND2Q9UQB3 1225 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 CCL26Q9Y258 94 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 PCDHGA2Q9Y5H1 932 aa10.76□□□□□ -0.69
TRIM35-204ENST00000521283 GTPBP10A4D1E9 387 aaKnown RBP10.75□□□□□ -0.69
TRIM35-204ENST00000521283 C2orf78A6NCI8 922 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 LEFTY2O00292 366 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 BIN1O00499 593 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 CHRNB1P11230 501 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 RALAP11233 206 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 VDRP11473 427 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 CCDC130P13994 396 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 CD72P21854 359 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 ADORA2BP29275 332 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 ATP5C1P36542 298 aaKnown RBP10.75□□□□□ -0.69
TRIM35-204ENST00000521283 EIF2DP41214 584 aaKnown RBP10.75□□□□□ -0.69
TRIM35-204ENST00000521283 MRE11P49959 708 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 CDR1P51861 262 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 CACNA2D1P54289 1103 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 BCAT1P54687 386 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 RAD23BP54727 409 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 FZD5Q13467 585 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 CAMK4Q16566 473 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 MEA1Q16626 185 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 TPD52L1Q16890 204 aaPredicted RBP10.75□□□□□ -0.69
TRIM35-204ENST00000521283 SGO2Q562F6 1265 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 LYPD8Q6UX82 237 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 CCDC186Q7Z3E2 898 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 EHBP1Q8NDI1 1231 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 WHAMMQ8TF30 809 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 NKD2Q969F2 451 aaPredicted RBP10.75□□□□□ -0.69
TRIM35-204ENST00000521283 SMG9Q9H0W8 520 aaKnown RBP10.75□□□□□ -0.69
TRIM35-204ENST00000521283 NUP62CLQ9H1M0 184 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 ATP13A2Q9NQ11 1180 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 CYLDQ9NQC7 956 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 FAM49BQ9NUQ9 324 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 NDRG2Q9UN36 371 aaKnown RBP10.75□□□□□ -0.69
TRIM35-204ENST00000521283 ZNF510Q9Y2H8 683 aa10.75□□□□□ -0.69
TRIM35-204ENST00000521283 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.74□□□□□ -0.69
TRIM35-204ENST00000521283 TLR5O60602 858 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 ADH1CP00326 375 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 SP9P0CG40 484 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 MBL2P11226 248 aaPredicted RBP10.74□□□□□ -0.69
TRIM35-204ENST00000521283 ACO1P21399 889 aaKnown RBP10.74□□□□□ -0.69
TRIM35-204ENST00000521283 HOXA6P31267 233 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 CNR2P34972 360 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 CXCL12P48061 93 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 KIF11P52732 1056 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 IFRD2Q12894 506 aaPredicted RBP10.74□□□□□ -0.69
TRIM35-204ENST00000521283 CCINQ13939 588 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 EML3Q32P44 896 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 LINC01559Q495D7 138 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 TMEM196Q5HYL7 178 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 PPP1R26Q5T8A7 1209 aaPredicted RBP10.74□□□□□ -0.69
TRIM35-204ENST00000521283 ADGRG2Q8IZP9 1017 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 SLC4A11Q8NBS3 891 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 ZMIZ2Q8NF64 920 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 SCAMP5Q8TAC9 235 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 ATRIPQ8WXE1 791 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 ZFYVE19Q96K21 471 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 TWNKQ96RR1 684 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 P2RY13Q9BPV8 354 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 EBF3Q9H4W6 596 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 THAP9Q9H5L6 903 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 HPS4Q9NQG7 708 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 PRMT8Q9NR22 394 aaPredicted RBP10.74□□□□□ -0.69
TRIM35-204ENST00000521283 TMEM30AQ9NV96 361 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 ZSCAN32Q9NX65 697 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 HMGXB4Q9UGU5 601 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 CHORDC1Q9UHD1 332 aaPredicted RBP10.74□□□□□ -0.69
TRIM35-204ENST00000521283 LSM7Q9UK45 103 aaKnown RBP10.74□□□□□ -0.69
TRIM35-204ENST00000521283 SH3BP1Q9Y3L3 701 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 MTF2Q9Y483 593 aaPredicted RBP10.74□□□□□ -0.69
TRIM35-204ENST00000521283 CPQQ9Y646 472 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 USP3Q9Y6I4 520 aa10.74□□□□□ -0.69
TRIM35-204ENST00000521283 MYO16Q9Y6X6 1858 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 CCDC163A0A0D9SF12 145 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 SHISA7A6NL88 538 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 CHURC1-FNTBB4DL54 471 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 HHLA1C9JL84 531 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 XPO1O14980 1071 aaKnown RBP10.73□□□□□ -0.69
TRIM35-204ENST00000521283 COCHO43405 550 aa10.73□□□□□ -0.69
TRIM35-204ENST00000521283 SETSIPP0DME0 302 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms