RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 CYLDQ9NQC7 956 aa20.75■□□□□ 0.91
PABPC1-215ENST00000520804 GREM1O60565 184 aa20.74■□□□□ 0.91
PABPC1-215ENST00000520804 ADAM23O75077 832 aa20.74■□□□□ 0.91
PABPC1-215ENST00000520804 TBX18O95935 607 aa20.74■□□□□ 0.91
PABPC1-215ENST00000520804 ATP5C1P36542 298 aaKnown RBP20.74■□□□□ 0.91
PABPC1-215ENST00000520804 ADAM9Q13443 819 aa20.74■□□□□ 0.91
PABPC1-215ENST00000520804 ANO4Q32M45 955 aa20.74■□□□□ 0.91
PABPC1-215ENST00000520804 PREPLQ4J6C6 727 aaPredicted RBP20.74■□□□□ 0.91
PABPC1-215ENST00000520804 HTR3DQ70Z44 454 aa20.74■□□□□ 0.91
PABPC1-215ENST00000520804 WHAMMQ8TF30 809 aa20.74■□□□□ 0.91
PABPC1-215ENST00000520804 GOLPH3LQ9H4A5 285 aa20.74■□□□□ 0.91
PABPC1-215ENST00000520804 PNPLA8Q9NP80 782 aa20.74■□□□□ 0.91
PABPC1-215ENST00000520804 ZDHHC4Q9NPG8 344 aa20.74■□□□□ 0.91
PABPC1-215ENST00000520804 OSER1Q9NX31 292 aa20.74■□□□□ 0.91
PABPC1-215ENST00000520804 DEC1Q9P2X7 70 aa20.74■□□□□ 0.91
PABPC1-215ENST00000520804 ATP6V1DQ9Y5K8 247 aa20.74■□□□□ 0.91
PABPC1-215ENST00000520804 TBC1D3BA6NDS4 549 aa20.73■□□□□ 0.91
PABPC1-215ENST00000520804 CYP26A1O43174 497 aa20.73■□□□□ 0.91
PABPC1-215ENST00000520804 CILPO75339 1184 aa20.73■□□□□ 0.91
PABPC1-215ENST00000520804 ACO1P21399 889 aaKnown RBP20.73■□□□□ 0.91
PABPC1-215ENST00000520804 KCNA4P22459 653 aa20.73■□□□□ 0.91
PABPC1-215ENST00000520804 ZCWPW2Q504Y3 356 aa20.73■□□□□ 0.91
PABPC1-215ENST00000520804 RNF43Q68DV7 783 aa20.73■□□□□ 0.91
PABPC1-215ENST00000520804 KCNV2Q8TDN2 545 aa20.73■□□□□ 0.91
PABPC1-215ENST00000520804 JAKMIP2Q96AA8 810 aa20.73■□□□□ 0.91
PABPC1-215ENST00000520804 MMRN2Q9H8L6 949 aa20.73■□□□□ 0.91
PABPC1-215ENST00000520804 TMEM8AQ9HCN3 771 aa20.73■□□□□ 0.91
PABPC1-215ENST00000520804 PCDHA5Q9Y5H7 936 aa20.73■□□□□ 0.91
PABPC1-215ENST00000520804 ABCA7Q8IZY2 2146 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 THADAQ6YHU6 1953 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 ZNF202O95125 648 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 CD58P19256 250 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 GTF2H1P32780 548 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 P2RY2P41231 377 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 MCCD1P59942 119 aaPredicted RBP20.72■□□□□ 0.91
PABPC1-215ENST00000520804 GOLGA8FQ08AF8 430 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 GOLGA8DPQ0D2H9 430 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 KLHDC10Q6PID8 442 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 TERB1Q8NA31 727 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 CCDC150Q8NCX0 1101 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 EDEM2Q9BV94 578 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 LSM14BQ9BX40 385 aaKnown RBP20.72■□□□□ 0.91
PABPC1-215ENST00000520804 DNAI2Q9GZS0 605 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 NMUR1Q9HB89 426 aa20.72■□□□□ 0.91
PABPC1-215ENST00000520804 NUP205Q92621 2012 aa20.71■□□□□ 0.91
PABPC1-215ENST00000520804 EDRF1Q3B7T1 1238 aa20.71■□□□□ 0.91
PABPC1-215ENST00000520804 C10orf76Q5T2E6 689 aa20.71■□□□□ 0.91
PABPC1-215ENST00000520804 KRT39Q6A163 491 aa20.71■□□□□ 0.91
PABPC1-215ENST00000520804 NUDT18Q6ZVK8 323 aa20.71■□□□□ 0.91
PABPC1-215ENST00000520804 CYP2U1Q7Z449 544 aa20.71■□□□□ 0.91
PABPC1-215ENST00000520804 TRMT11Q7Z4G4 463 aaKnown RBP20.71■□□□□ 0.91
PABPC1-215ENST00000520804 ZNF513Q8N8E2 541 aaPredicted RBP20.71■□□□□ 0.91
PABPC1-215ENST00000520804 RLN3Q8WXF3 142 aa20.71■□□□□ 0.91
PABPC1-215ENST00000520804 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.71■□□□□ 0.91
PABPC1-215ENST00000520804 BCCIPQ9P287 314 aaKnown RBP eCLIP20.71■□□□□ 0.91
PABPC1-215ENST00000520804 LSM7Q9UK45 103 aaKnown RBP20.71■□□□□ 0.91
PABPC1-215ENST00000520804 STARD13Q9Y3M8 1113 aa20.71■□□□□ 0.91
PABPC1-215ENST00000520804 A0A1W2PQH9 124 aa20.7■□□□□ 0.9
PABPC1-215ENST00000520804 TCRBV21S2A2A0A5A6 115 aa20.7■□□□□ 0.9
PABPC1-215ENST00000520804 LNP1A1A4G5 178 aa20.7■□□□□ 0.9
PABPC1-215ENST00000520804 KHNYNO15037 678 aaKnown RBP20.7■□□□□ 0.9
PABPC1-215ENST00000520804 TRIM24O15164 1050 aa20.7■□□□□ 0.9
PABPC1-215ENST00000520804 RARGP13631 454 aa20.7■□□□□ 0.9
PABPC1-215ENST00000520804 KIF11P52732 1056 aa20.7■□□□□ 0.9
PABPC1-215ENST00000520804 PPP1R26Q5T8A7 1209 aaPredicted RBP20.7■□□□□ 0.9
PABPC1-215ENST00000520804 HMGB4Q8WW32 186 aa20.7■□□□□ 0.9
PABPC1-215ENST00000520804 SEMA4DQ92854 862 aa20.7■□□□□ 0.9
PABPC1-215ENST00000520804 FAXDC2Q96IV6 333 aa20.7■□□□□ 0.9
PABPC1-215ENST00000520804 SPACA7Q96KW9 195 aa20.7■□□□□ 0.9
PABPC1-215ENST00000520804 DUSP16Q9BY84 665 aa20.7■□□□□ 0.9
PABPC1-215ENST00000520804 DNAJC17Q9NVM6 304 aaKnown RBP20.7■□□□□ 0.9
PABPC1-215ENST00000520804 MARK1Q9P0L2 795 aa20.7■□□□□ 0.9
PABPC1-215ENST00000520804 HCN2Q9UL51 889 aa20.7■□□□□ 0.9
PABPC1-215ENST00000520804 NEDD8-MDP1E9PL57 170 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 MDM4O15151 490 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 CACNG3O60359 315 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 TYRP14679 529 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 PLA2G4AP47712 749 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 DHPSP49366 369 aaPredicted RBP20.69■□□□□ 0.9
PABPC1-215ENST00000520804 BYSLQ13895 437 aaKnown RBP20.69■□□□□ 0.9
PABPC1-215ENST00000520804 MAP7D1Q3KQU3 841 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 ZNF394Q53GI3 561 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 N4BP2L1Q5TBK1 243 aaPredicted RBP20.69■□□□□ 0.9
PABPC1-215ENST00000520804 GRAMD4Q6IC98 578 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 LPCAT2Q7L5N7 544 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 CCDC186Q7Z3E2 898 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 SCD5Q86SK9 330 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 SMYD4Q8IYR2 804 aaPredicted RBP20.69■□□□□ 0.9
PABPC1-215ENST00000520804 PGBD3Q8N328 593 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 FRMD1Q8N878 549 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 CCDC34Q96HJ3 373 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 XPO6Q96QU8 1125 aaKnown RBP20.69■□□□□ 0.9
PABPC1-215ENST00000520804 BBS2Q9BXC9 721 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 GDPD2Q9HCC8 539 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 WDR35Q9P2L0 1181 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 DNMT3LQ9UJW3 386 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 NUDT5Q9UKK9 219 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 CIZ1Q9ULV3 898 aaPredicted RBP20.69■□□□□ 0.9
PABPC1-215ENST00000520804 USP3Q9Y6I4 520 aa20.69■□□□□ 0.9
PABPC1-215ENST00000520804 MAP3K13O43283 966 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms