RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 MEI1Q5TIA1 1274 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 BSPRYQ5W0U4 402 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 CC2D1AQ6P1N0 951 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-208ENST00000520561 LILRA6Q6PI73 481 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 SPATA31D4Q6ZUB0 917 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 RTL10Q7L3V2 364 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 RSRC2Q7L4I2 434 aaKnown RBP9.36□□□□□ -0.91
CSMD1-208ENST00000520561 BEND5Q7L4P6 421 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 STRADAQ7RTN6 431 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 TADA2BQ86TJ2 420 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 MON1AQ86VX9 555 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 RHOT1Q8IXI2 618 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 RNF139Q8WU17 664 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 FAM172AQ8WUF8 416 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 EDEM1Q92611 657 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 KHSRPQ92945 711 aaKnown RBP eCLIP9.36□□□□□ -0.91
CSMD1-208ENST00000520561 MRPL38Q96DV4 380 aaKnown RBP9.36□□□□□ -0.91
CSMD1-208ENST00000520561 TRMT2BQ96GJ1 504 aaKnown RBP9.36□□□□□ -0.91
CSMD1-208ENST00000520561 ZNF512Q96ME7 567 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-208ENST00000520561 GCNAQ96QF7 691 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 CDK5RAP1Q96SZ6 601 aaKnown RBP9.36□□□□□ -0.91
CSMD1-208ENST00000520561 CDCA3Q99618 268 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-208ENST00000520561 DDX23Q9BUQ8 820 aaKnown RBP9.36□□□□□ -0.91
CSMD1-208ENST00000520561 FAM204AQ9H8W3 233 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 ABCC13Q9NSE7 274 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 IL37Q9NZH6 218 aa9.36□□□□□ -0.91
CSMD1-208ENST00000520561 PACSIN2Q9UNF0 486 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-208ENST00000520561 TMEM265A0A087WTH1 108 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 A0A1W2PQH9 124 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 EPOPA6NHQ4 379 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 CEP290O15078 2479 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 PRPSAP2O60256 369 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 XYLBO75191 536 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 LRCH4O75427 683 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 URI1O94763 535 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-208ENST00000520561 F9P00740 461 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 KRT7P08729 469 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 HNRNPA1P09651 372 aaKnown RBP eCLIP9.35□□□□□ -0.91
CSMD1-208ENST00000520561 SRGAP2BP0DMP2 458 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 HOXA9P31269 272 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 CTNNA1P35221 906 aaKnown RBP9.35□□□□□ -0.91
CSMD1-208ENST00000520561 PCK1P35558 622 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 PPP3CCP48454 512 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 DUSP6Q16828 381 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 C15orf59Q2T9L4 293 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-208ENST00000520561 LRIT3Q3SXY7 679 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 ODF2Q5BJF6 829 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 ZFYVE27Q5T4F4 411 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 TRNP1Q6NT89 227 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 SND1Q7KZF4 910 aaKnown RBP eCLIP9.35□□□□□ -0.91
CSMD1-208ENST00000520561 SCD5Q86SK9 330 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 HDAC7Q8WUI4 952 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 PSMG2Q969U7 264 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 HES6Q96HZ4 224 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 SERPINB11Q96P15 392 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 TBCBQ99426 244 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 TLR10Q9BXR5 811 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 ZNF576Q9H609 170 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 NSUN3Q9H649 340 aaKnown RBP9.35□□□□□ -0.91
CSMD1-208ENST00000520561 TLE6Q9H808 572 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 RRAGDQ9NQL2 400 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-208ENST00000520561 OLA1Q9NTK5 396 aaKnown RBP9.35□□□□□ -0.91
CSMD1-208ENST00000520561 TMEM51Q9NW97 253 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 CLIC5Q9NZA1 410 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 TRPM5Q9NZQ8 1165 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 SNX12Q9UMY4 172 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 NAALADL1Q9UQQ1 740 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 HCFC2Q9Y5Z7 792 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 SAR1BQ9Y6B6 198 aa9.35□□□□□ -0.91
CSMD1-208ENST00000520561 SYNJ2BP-COX16A0A087WUM0 186 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 M0QYT0 321 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 KCNK3O14649 394 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 FANCGO15287 622 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 CCL16O15467 120 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 TLR5O60602 858 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 ZMYND10O75800 440 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 KRT1P04264 644 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 RARGP13631 454 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 EPCAMP16422 314 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 HMGA1P17096 107 aaKnown RBP9.34□□□□□ -0.91
CSMD1-208ENST00000520561 MIPP30301 263 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 CDC25CP30307 473 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 GBP1P32455 592 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 NRIP1P48552 1158 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 RWDD2BP57060 319 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 SLC25A11Q02978 314 aaKnown RBP9.34□□□□□ -0.91
CSMD1-208ENST00000520561 DEUP1Q05D60 604 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 NME3Q13232 169 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 TUBB2AQ13885 445 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 PABPC1LQ4VXU2 614 aaKnown RBP9.34□□□□□ -0.91
CSMD1-208ENST00000520561 SEL1L2Q5TEA6 688 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 LRRC38Q5VT99 294 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 DAB2IPQ5VWQ8 1189 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 SYPL2Q5VXT5 272 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 PAPD7Q5XG87 772 aaKnown RBP9.34□□□□□ -0.91
CSMD1-208ENST00000520561 MSANTD2Q6P1R3 559 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 SCYL2Q6P3W7 929 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 POLNQ7Z5Q5 900 aa9.34□□□□□ -0.91
CSMD1-208ENST00000520561 DNAJB7Q7Z6W7 309 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-208ENST00000520561 ADGRD2Q7Z7M1 963 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms