RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 HIST2H2AA3Q6FI13 130 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 OR2W6PQ8NHA6 318 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 SPATA18Q8TC71 538 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 ANKS1AQ92625 1134 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 SEPT5Q99719 369 aaPredicted RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 ERP44Q9BS26 406 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 TIMMDC1Q9NPL8 285 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 PSMC3P17980 439 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 CYP2B6P20813 491 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 NPEPPSP55786 919 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 LPCAT2Q7L5N7 544 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 SAMD7Q7Z3H4 446 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 PRUNE1Q86TP1 453 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 C11orf74Q86VG3 221 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 ANKRD13AQ8IZ07 590 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 PPP1R36Q96LQ0 422 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 UBE2OQ9C0C9 1292 aaKnown RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 THAP2Q9H0W7 228 aa12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 C20orf96Q9NUD7 363 aaPredicted RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 DDX20Q9UHI6 824 aaKnown RBP12.49□□□□□ -0.41
ERGIC1-208ENST00000520399 NLRP11P59045 1033 aaKnown RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 RPS7P62081 194 aaKnown RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 CNTN1Q12860 1018 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 GSTA3Q16772 222 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 MDH1BQ5I0G3 518 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 FRMD8P1Q9BZ68 369 aaPredicted RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 CELF4Q9BZC1 486 aaKnown RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 IPPQ9Y573 584 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 IDH3BO43837 385 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 CLASP2O75122 1294 aaKnown RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 SMTNL2Q2TAL5 461 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 ESRP1Q6NXG1 681 aaKnown RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 ERAP2Q6P179 960 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 C4orf33Q8N1A6 199 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 VPS37AQ8NEZ2 397 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 C9orf72Q96LT7 481 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 MUC3BQ9H195 1237 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 COL3A1P02461 1466 aaPredicted RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 ADGRA3Q8IWK6 1321 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 SAC3D1A6NKF1 404 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 AXIN1O15169 862 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 H2AFYO75367 372 aaKnown RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 SEMA3DO95025 777 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 IRF1P10914 325 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 ATP6V1C1P21283 382 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 TUFMP49411 452 aaKnown RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 TAF6P49848 677 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 TOB1P50616 345 aaPredicted RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 ERVK-24P63145 666 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 IL31Q6EBC2 164 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 MICU2Q8IYU8 434 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 C1orf131Q8NDD1 294 aaKnown RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 ZIM3Q96PE6 472 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 RBBP8Q99708 897 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 SCAF8Q9UPN6 1271 aaKnown RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 SPATA31D1Q6ZQQ2 1576 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 SGPL1O95470 568 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 POLBP06746 335 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 EPB42P16452 691 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 SCNN1BP51168 640 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 NEK10Q6ZWH5 1172 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 KAZALD1Q96I82 304 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 GMCL1Q96IK5 515 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 KCNK16Q96T55 309 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 ZSWIM1Q9BR11 485 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 TARS2Q9BW92 718 aaKnown RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 TASP1Q9H6P5 420 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 KRT84Q9NSB2 600 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 HPSEQ9Y251 543 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 SRRM3A6NNA2 597 aaPredicted RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 SPRP35270 261 aaPredicted RBP12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 NAMPTP43490 491 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 ARHGEF7Q14155 803 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 GIT2Q14161 759 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 DCAF6Q58WW2 860 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 C6orf10Q5SRN2 563 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 RFX8Q6ZV50 586 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 ZNF438Q7Z4V0 828 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 GALNT6Q8NCL4 622 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 APPL1Q9UKG1 709 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 PKP3Q9Y446 797 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 SPEF1Q9Y4P9 236 aa12.48□□□□□ -0.41
ERGIC1-208ENST00000520399 CST8O60676 142 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 PGM3O95394 542 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 LRRC36Q1X8D7 754 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 EPC2Q52LR7 807 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 ATAD3BQ5T9A4 648 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 MRPL39Q9NYK5 338 aaKnown RBP12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 CYP39A1Q9NYL5 469 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 CDYLQ9Y232 598 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 PDZK1P1A8MUH7 402 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 F8W810 466 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 UBE2Q2LH0YL09 131 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 FNTAP49354 379 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 ZNF484Q5JVG2 852 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 C3orf62Q6ZUJ4 267 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 TRIM48Q8IWZ4 208 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 REXO1L1PQ8IX06 675 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 PCYOX1LQ8NBM8 494 aa12.47□□□□□ -0.41
ERGIC1-208ENST00000520399 KIFC1Q9BW19 673 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms