RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ATP2A3Q93084 1043 aa13.99□□□□□ -0.17
VEGFA-219ENST00000518824 MSANTD3Q96H12 275 aa13.99□□□□□ -0.17
VEGFA-219ENST00000518824 HSD3B7Q9H2F3 369 aa13.99□□□□□ -0.17
VEGFA-219ENST00000518824 FANCLQ9NW38 375 aa13.99□□□□□ -0.17
VEGFA-219ENST00000518824 HESX1Q9UBX0 185 aa13.99□□□□□ -0.17
VEGFA-219ENST00000518824 APEX2Q9UBZ4 518 aa13.99□□□□□ -0.17
VEGFA-219ENST00000518824 CYTH4Q9UIA0 394 aa13.99□□□□□ -0.17
VEGFA-219ENST00000518824 KIAA1549LQ6ZVL6 1849 aa13.99□□□□□ -0.17
VEGFA-219ENST00000518824 GTPBP10A4D1E9 387 aaKnown RBP13.98□□□□□ -0.17
VEGFA-219ENST00000518824 YJEFN3A6XGL0 299 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 E7ENQ6 273 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 LAMTOR5O43504 91 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 LETM1O95202 739 aaPredicted RBP13.98□□□□□ -0.17
VEGFA-219ENST00000518824 MBD3O95983 291 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 ZBED1O96006 694 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 KLKB1P03952 638 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 TDGF1P13385 188 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 ATP5C1P36542 298 aaKnown RBP13.98□□□□□ -0.17
VEGFA-219ENST00000518824 MRE11P49959 708 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 YWHAGP61981 247 aaKnown RBP eCLIP13.98□□□□□ -0.17
VEGFA-219ENST00000518824 CSTF1Q05048 431 aaKnown RBP13.98□□□□□ -0.17
VEGFA-219ENST00000518824 DMWDQ09019 674 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 EFEMP1Q12805 493 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 NCAPHQ15003 741 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 KRT31Q15323 416 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 LY6G5CQ5SRR4 150 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 SASS6Q6UVJ0 657 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 MIB1Q86YT6 1006 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 FAM114A1Q8IWE2 563 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 KCTD13Q8WZ19 329 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 SHC3Q92529 594 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 P2RY13Q9BPV8 354 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 DNAI2Q9GZS0 605 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 NACA2Q9H009 215 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 VPS16Q9H269 839 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 LRRC4Q9HBW1 653 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 TJP2Q9UDY2 1190 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 RASAL2Q9UJF2 1139 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 DNAJC12Q9UKB3 198 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 KIAA1257Q9ULG3 409 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 SH3BP1Q9Y3L3 701 aa13.98□□□□□ -0.17
VEGFA-219ENST00000518824 DMDP11532 3685 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 E2F8A0AVK6 867 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 FAM170AA1A519 330 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 FOXN3O00409 490 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-219ENST00000518824 PES1O00541 588 aaKnown RBP13.97□□□□□ -0.17
VEGFA-219ENST00000518824 TRIM24O15164 1050 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 STC2O76061 302 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 NFATC1O95644 943 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 HMBSP08397 361 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 SETSIPP0DME0 302 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 HOXD11P31277 338 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-219ENST00000518824 USP8P40818 1118 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 NBL1P41271 181 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 GPD2P43304 727 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 MFAP3P55082 362 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 DAOAP59103 153 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 TYRO3Q06418 890 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 STX1AQ16623 288 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 CT47A1Q5JQC4 288 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-219ENST00000518824 CAVIN1Q6NZI2 390 aaKnown RBP13.97□□□□□ -0.17
VEGFA-219ENST00000518824 ASCL5Q7RTU5 278 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 TMEM25Q86YD3 366 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 ZNF606Q8WXB4 792 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 EDEM1Q92611 657 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 CD101Q93033 1021 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 PRMT8Q9NR22 394 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-219ENST00000518824 ANO10Q9NW15 660 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 CLIC5Q9NZA1 410 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 DNMT3LQ9UJW3 386 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 FHOD1Q9Y613 1164 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 MYO15AQ9UKN7 3530 aa13.97□□□□□ -0.17
VEGFA-219ENST00000518824 THAP12O43422 761 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 RNF40O75150 1001 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 CHRM1P11229 460 aaPredicted RBP13.96□□□□□ -0.17
VEGFA-219ENST00000518824 GNA15P30679 374 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 CLCN1P35523 988 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 MAGEA9P43362 315 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 LRRC32Q14392 662 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 BSPRYQ5W0U4 402 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 KLHDC10Q6PID8 442 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 Q6ZNB5 142 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 HTR3DQ70Z44 454 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 DDX42Q86XP3 938 aaKnown RBP eCLIP13.96□□□□□ -0.175e-7■■■■□ 19.9
VEGFA-219ENST00000518824 ZNF276Q8N554 614 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 WDTC1Q8N5D0 677 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 NAT16Q8N8M0 369 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 LSM14BQ9BX40 385 aaKnown RBP13.96□□□□□ -0.17
VEGFA-219ENST00000518824 MIS12Q9H081 205 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 SFMBT1Q9UHJ3 866 aa13.96□□□□□ -0.17
VEGFA-219ENST00000518824 SLC12A8A0AV02 714 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 K7EQS6 105 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 K7ESF4 209 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 EPHB6O15197 1021 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 MSI1O43347 362 aaKnown RBP13.95□□□□□ -0.18
VEGFA-219ENST00000518824 RALAP11233 206 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 ADH5P11766 374 aa13.95□□□□□ -0.18
VEGFA-219ENST00000518824 EEF1GP26641 437 aaKnown RBP13.95□□□□□ -0.18
VEGFA-219ENST00000518824 RPL34P49207 117 aaKnown RBP13.95□□□□□ -0.18
VEGFA-219ENST00000518824 PSEN1P49768 467 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms