RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 FNDC8Q8TC99 324 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 LEO1Q8WVC0 666 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 HNRNPLLQ8WVV9 542 aaKnown RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 C11orf24Q96F05 449 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 INTS10Q9NVR2 710 aaKnown RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 LRRC42Q9Y546 428 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 ATP10DQ9P241 1426 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 MINK1Q8N4C8 1332 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 CDHR2Q9BYE9 1310 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 DBX1A6NMT0 343 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 KCNJ18B7U540 433 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 BTBD19C9JJ37 291 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 BTN3A1O00481 513 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 NPC1O15118 1278 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 SEMA3DO95025 777 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 ARF4P18085 180 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 HLA-FP30511 346 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 PCYT1AP49585 367 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 NRLP54845 237 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 EMP3P54852 163 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 GRB10Q13322 594 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 RAPSNQ13702 412 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 KCNJ12Q14500 433 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 PHKG1Q16816 387 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 GFOD2Q3B7J2 385 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 ZMYM1Q5SVZ6 1142 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 DEFB132Q7Z7B7 95 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 SLFN11Q7Z7L1 901 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 LONP2Q86WA8 852 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 CMIPQ8IY22 773 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 GPR156Q8NFN8 814 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 RAET1EQ8TD07 263 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 ATP8B4Q8TF62 1192 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 SCFD2Q8WU76 684 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 CENPIQ92674 756 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 HSPBAP1Q96EW2 488 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 AK8Q96MA6 479 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 SLC4A9Q96Q91 983 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 BPIFA3Q9BQP9 254 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 RBM42Q9BTD8 480 aaKnown RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 AP5M1Q9H0R1 490 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 VCXQ9H320 206 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 MARCH7Q9H992 704 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 ZNF275Q9NSD4 429 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 SAMSN1Q9NSI8 373 aaKnown RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 POLR3BQ9NW08 1133 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 HBS1LQ9Y450 684 aaKnown RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 E7ENQ6 273 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 RASGRF2O14827 1237 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 ETS2P15036 469 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 PON1P27169 355 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 RABIFP47224 123 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 AIF1P55008 147 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 PHC1P78364 1004 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 CHRNEQ04844 493 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 KCTD21Q4G0X4 260 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 RASIP1Q5U651 963 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 HGSNATQ68CP4 663 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 CCDC102BQ68D86 513 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 KLHL35Q6PF15 583 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 LRRC6Q86X45 466 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 NME9Q86XW9 330 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 RNF135Q8IUD6 432 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 MAPKAPK5Q8IW41 473 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 SCUBE3Q8IX30 993 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 ATAD1Q8NBU5 361 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 RAD51AP1Q96B01 352 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 AKT1S1Q96B36 256 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 TOE1Q96GM8 510 aaKnown RBP7.49□□□□□ -1.21
NIPBL-208ENST00000514335 CTRCQ99895 268 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 PRKD2Q9BZL6 878 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 FAM192AQ9GZU8 254 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 CDHR5Q9HBB8 845 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 CRTAC1Q9NQ79 661 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 PSME2Q9UL46 239 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 DOLKQ9UPQ8 538 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 KCNH4Q9UQ05 1017 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 STK38LQ9Y2H1 464 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 ADAMTSL1Q8N6G6 1762 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 LDLRAD4O15165 306 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 SPOPO43791 374 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 DOK2O60496 412 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 GJB3O75712 270 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 QDPRP09417 244 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 CTNNA2P26232 953 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 SHMT1P34896 483 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 MSH2P43246 934 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 SLC9A3P48764 834 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 DGKGP49619 791 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 RAB14P61106 215 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 COPS2P61201 443 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 HAND2P61296 217 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 KRT76Q01546 638 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 DNAJC3Q13217 504 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 LASP1Q14847 261 aaKnown RBP7.49□□□□□ -1.21
NIPBL-208ENST00000514335 GNASQ5JWF2 1037 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 RINT1Q6NUQ1 792 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 DEGS2Q6QHC5 323 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 FAM71DQ8N9W8 422 aa7.49□□□□□ -1.21
NIPBL-208ENST00000514335 ZNF669Q96BR6 464 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms