RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 MID2Q9UJV3 735 aa2.43□□□□□ -2.02
SMARCAD1-208ENST00000514232 USP22Q9UPT9 525 aa2.43□□□□□ -2.02
SMARCAD1-208ENST00000514232 F8W8V4 182 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 GTPBP1O00178 669 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 TPP1O14773 563 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 PMPCBO75439 489 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 BTF3P20290 206 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 PEX2P28328 305 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 EPHB2P29323 1055 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 PRKAR1BP31321 381 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 UQCRC1P31930 480 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 GKP32189 559 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 GNALP38405 381 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 PTDSS1P48651 473 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 COPB1P53618 953 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 AK2P54819 239 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 TPTEP56180 551 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 CCNIQ14094 377 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 GALEQ14376 348 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 SLC29A2Q14542 456 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 GBX1Q14549 363 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 POLD3Q15054 466 aaPredicted RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 RNASE12Q5GAN4 147 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 HIST2H2BCQ6DN03 193 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 SLC18B1Q6NT16 456 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 TRIM72Q6ZMU5 477 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 UNC13DQ70J99 1090 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 TTC30AQ86WT1 665 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 CNGA4Q8IV77 575 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 FOXP4Q8IVH2 680 aaPredicted RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 SDR16C5Q8N3Y7 309 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 CCDC33Q8N5R6 958 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 SIRT6Q8N6T7 355 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 RP9Q8TA86 221 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 TBC1D5Q92609 795 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 NMD3Q96D46 503 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 DAZAP1Q96EP5 407 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 APIPQ96GX9 242 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 MPHOSPH6Q99547 160 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 MYD88Q99836 296 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 CIPCQ9C0C6 399 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 NRIP3Q9NQ35 241 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 GJB4Q9NTQ9 266 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 DNMT3BQ9UBC3 853 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 MGAT4CQ9UBM8 478 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 ASAP1Q9ULH1 1129 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 MAGED2Q9UNF1 606 aaPredicted RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 ICKQ9UPZ9 632 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 DRG1Q9Y295 367 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 LRCH1Q9Y2L9 728 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 CDY1Q9Y6F8 540 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 COMMD10Q9Y6G5 202 aa2.42□□□□□ -2.02
SMARCAD1-208ENST00000514232 CCDC194A0A1B0GVG4 234 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 SMIM35A0A1B0GVV1 85 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 TCRBV5S1A1TA0A578 114 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 TRIM43BA6NCK2 446 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 KCNU1A8MYU2 1149 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 ISM1B1AKI9 464 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 PSMD9O00233 223 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 PPP6CO00743 305 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 THAP12O43422 761 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 PIAS2O75928 621 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 ZBED1O96006 694 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 FGAP02671 866 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 CREB1P16220 341 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 ARHGAP25P42331 645 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 MTHFSP49914 203 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 GATMP50440 423 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 RENBPP51606 427 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 DEUP1Q05D60 604 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 LMAN2Q12907 356 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 ARHGEF7Q14155 803 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 NPY5RQ15761 445 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 ZNF750Q32MQ0 723 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 GORABQ5T7V8 394 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 MIS18BP1Q6P0N0 1132 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 KIRREL2Q6UWL6 708 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 CLEC9AQ6UXN8 241 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 CATSPERGQ6ZRH7 1159 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 CHST15Q7LFX5 561 aaPredicted RBP2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 YAF2Q8IY57 180 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 FAM186BQ8IYM0 893 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 METTL25Q8N6Q8 603 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 NGDNQ8NEJ9 315 aaKnown RBP2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 PJA1Q8NG27 643 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 TRIM43Q96BQ3 446 aaPredicted RBP2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 CTHRC1Q96CG8 243 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 RITA1Q96K30 269 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 CCDC17Q96LX7 622 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 ASB2Q96Q27 587 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 PPP1R9BQ96SB3 815 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 THAP7Q9BT49 309 aaPredicted RBP2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 TRMOQ9BU70 441 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 SELENOOQ9BVL4 669 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 SARGQ9BW04 601 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 XPNPEP3Q9NQH7 507 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 KLHL13Q9P2N7 655 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 AMFRQ9UKV5 643 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 SH2B3Q9UQQ2 575 aa2.41□□□□□ -2.02
SMARCAD1-208ENST00000514232 LOC102723971A0A1B0GUV8 181 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms