RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ISCUQ9H1K1 167 aa5.26□□□□□ -1.57
TRAPPC11-208ENST00000511955 HAUS4Q9H6D7 363 aa5.26□□□□□ -1.57
TRAPPC11-208ENST00000511955 SDHAF3Q9NRP4 125 aa5.26□□□□□ -1.57
TRAPPC11-208ENST00000511955 FKBP14Q9NWM8 211 aa5.26□□□□□ -1.57
TRAPPC11-208ENST00000511955 C5AR2Q9P296 337 aa5.26□□□□□ -1.57
TRAPPC11-208ENST00000511955 CACNG4Q9UBN1 327 aa5.26□□□□□ -1.57
TRAPPC11-208ENST00000511955 AMACRQ9UHK6 382 aa5.26□□□□□ -1.57
TRAPPC11-208ENST00000511955 ANGPTL2Q9UKU9 493 aa5.26□□□□□ -1.57
TRAPPC11-208ENST00000511955 CSADQ9Y600 493 aa5.26□□□□□ -1.57
TRAPPC11-208ENST00000511955 DOCK2Q92608 1830 aa5.26□□□□□ -1.57
TRAPPC11-208ENST00000511955 MAST2Q6P0Q8 1798 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 TRIM43BA6NCK2 446 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 ENO4A6NNW6 628 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 TTC34A8MYJ7 566 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CHURC1-FNTBB4DL54 471 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 H7BY64 318 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 SMAD6O43541 496 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CAVIN2O95810 425 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CSH1P0DML2 217 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CSH2P0DML3 217 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 PTPN2P17706 415 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CHMLP26374 656 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 MLH1P40692 756 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 ACAA2P42765 397 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 TUFMP49411 452 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 DNM2P50570 870 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 EPHA4P54764 986 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 TRA2BP62995 288 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 GRSF1Q12849 480 aaKnown RBP eCLIP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 RPA4Q13156 261 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 RIPK1Q13546 671 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 PTK2BQ14289 1009 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 LRRC32Q14392 662 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 RAB3GAP1Q15042 981 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 SV2CQ496J9 727 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 KCTD21Q4G0X4 260 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZNF805Q5CZA5 627 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CYP4A22Q5TCH4 519 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 DCAF15Q66K64 600 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 PDPK2PQ6A1A2 396 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 KIAA1211LQ6NV74 962 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 RGMBQ6NW40 437 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 LEKR1Q6ZMV7 388 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZBTB33Q86T24 672 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CLEC10AQ8IUN9 316 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 SIAH1Q8IUQ4 282 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 WDR49Q8IV35 697 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 PALM2Q8IXS6 379 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 MIER2Q8N344 545 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZNF397Q8NF99 534 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 LRTOMTQ8WZ04 291 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 EXT2Q93063 718 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 TRIM43Q96BQ3 446 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 MIEF2Q96C03 454 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 OPTNQ96CV9 577 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 TMEM169Q96HH4 297 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CAPNS2Q96L46 248 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 SMC6Q96SB8 1091 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CORO1BQ9BR76 489 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 ARHGAP9Q9BRR9 750 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 THUMPD3Q9BV44 507 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 ADNPQ9H2P0 1102 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 DPH5Q9H2P9 285 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 MID1IP1Q9NPA3 183 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 SUCLA2Q9P2R7 463 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 PI4KBQ9UBF8 816 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 SERPINB13Q9UIV8 391 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 ANAPC5Q9UJX4 755 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 KIAA1257Q9ULG3 409 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZMYND8Q9ULU4 1186 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 L1RE1Q9UN81 338 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CLCA2Q9UQC9 943 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 TNFSF13BQ9Y275 285 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 GPSM3Q9Y4H4 160 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 RFX7Q2KHR2 1363 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CCDC171Q6TFL3 1326 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 hCG_1809904A0A1W2PP81 198 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 A0A1W2PPE2 198 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 A0A1W2PR64 198 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CCDC78A2IDD5 438 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 OR6C74A6NCV1 312 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 OR6C65A6NJZ3 312 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 H0YIV9 168 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 PSMD9O00233 223 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 PSMA7O14818 248 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 FOXP2O15409 715 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 B3GALT2O43825 422 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 TBX10O75333 385 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 UBXN7O94888 489 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 SEC31AO94979 1220 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 FTCDO95954 541 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 HNRNPA1P09651 372 aaKnown RBP eCLIP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 TMIGD3P0DMS9 266 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 HSPD1P10809 573 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 RARBP10826 455 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 MYL4P12829 197 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 RPL9P32969 192 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 ETV3P41162 512 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 GRIA2P42262 883 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms