RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 SEL1L2Q5TEA6 688 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 PLPP4Q5VZY2 271 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 CCDC70Q6NSX1 233 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 FUT10Q6P4F1 479 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 CLEC20AQ6ZU45 233 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 PAQR9Q6ZVX9 377 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 ERMP1Q7Z2K6 904 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 DDX53Q86TM3 631 aaKnown RBP9.54□□□□□ -0.88
NR1I3-228ENST00000511676 DNAAF5Q86Y56 855 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 PSTKQ8IV42 348 aaKnown RBP9.54□□□□□ -0.88
NR1I3-228ENST00000511676 MMGT1Q8N4V1 131 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 GPR161Q8N6U8 529 aaKnown RBP9.54□□□□□ -0.88
NR1I3-228ENST00000511676 EXD1Q8NHP7 514 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 UBA3Q8TBC4 463 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 SPPL2BQ8TCT7 592 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 HDAC7Q8WUI4 952 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 PIK3R5Q8WYR1 880 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 PCED1BQ96HM7 432 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 RBM41Q96IZ5 413 aaKnown RBP9.54□□□□□ -0.88
NR1I3-228ENST00000511676 RUNDC3BQ96NL0 473 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 TBCBQ99426 244 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 CARD6Q9BX69 1037 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 B3GNT5Q9BYG0 378 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 RHOBTB2Q9BYZ6 727 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 CWH43Q9H720 699 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 PRDM16Q9HAZ2 1276 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 KRT82Q9NSB4 513 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 COMMD8Q9NX08 183 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 MARCH5Q9NX47 278 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 DNAJB4Q9UDY4 337 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 BACE2Q9Y5Z0 518 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 ZFP37Q9Y6Q3 630 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-228ENST00000511676 PTPRSQ13332 1948 aa9.54□□□□□ -0.88
NR1I3-228ENST00000511676 GOLGA6L10A0A0M3HER8 536 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 TARSL2A2RTX5 802 aaKnown RBP9.53□□□□□ -0.88
NR1I3-228ENST00000511676 TRIM66O15016 1216 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 PAPSS1O43252 624 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-228ENST00000511676 TBC1D4O60343 1298 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 AP1G2O75843 785 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 RNF8O76064 485 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 GPD1P21695 349 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 IBSPP21815 317 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-228ENST00000511676 ADORA2BP29275 332 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 RFC1P35251 1148 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-228ENST00000511676 AIF1P55008 147 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 RPL7AP62424 266 aaKnown RBP9.53□□□□□ -0.88
NR1I3-228ENST00000511676 USP41Q3LFD5 358 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
NR1I3-228ENST00000511676 KIAA0319Q5VV43 1072 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 PM20D1Q6GTS8 502 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 ASTLQ6HA08 431 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-228ENST00000511676 SLC8B1Q6J4K2 584 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 KIAA1841Q6NSI8 718 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 CCDC149Q6ZUS6 474 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 FAM183BPQ6ZVS7 135 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 STRADAQ7RTN6 431 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 PIGZQ86VD9 579 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 SIX6OS1Q8N1H7 587 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 OR10T2Q8NGX3 314 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 COG1Q8WTW3 980 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 TEKT4Q8WW24 435 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 UBXN4Q92575 508 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 ALG3Q92685 438 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 MYLPFQ96A32 169 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 SHDQ96IW2 340 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 C8orf48Q96LL4 319 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 MED10Q9BTT4 135 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 TTPALQ9BTX7 342 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 SFXN1Q9H9B4 322 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 LRRC4Q9HBW1 653 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 ST7Q9NRC1 585 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 MRPL17Q9NRX2 175 aaKnown RBP9.53□□□□□ -0.88
NR1I3-228ENST00000511676 HOMER3Q9NSC5 361 aa9.53□□□□□ -0.88
NR1I3-228ENST00000511676 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.53□□□□□ -0.88
NR1I3-228ENST00000511676 UQCRHLA0A096LP55 91 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 MYBPHLA2RUH7 354 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 HHLA1C9JL84 531 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 PER2O15055 1255 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 LINC01565O15544 149 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 ATP2C2O75185 946 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 DAB1O75553 588 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 SOD2P04179 222 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 ADH1AP07327 375 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 UQCRHP07919 91 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 CTSAP10619 480 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 ACAT1P24752 427 aaKnown RBP9.52□□□□□ -0.89
NR1I3-228ENST00000511676 PSMA2P25787 234 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 SDC4P31431 198 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 MATKP42679 507 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 CLCN6P51797 869 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 ZNF135P52742 658 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-228ENST00000511676 ZNF252P-AS1Q0IIN9 211 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 GPR17Q13304 367 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 CYP4A22Q5TCH4 519 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 FAM171A1Q5VUB5 890 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 OR6B2Q6IFH4 312 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 RTL10Q7L3V2 364 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 SPATA2LQ8IUW3 424 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-228ENST00000511676 RCOR2Q8IZ40 523 aa9.52□□□□□ -0.89
NR1I3-228ENST00000511676 VPS52Q8N1B4 723 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms