RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 UBXN11Q5T124 520 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 ZNF697Q5TEC3 545 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 CDCA2Q69YH5 1023 aaPredicted RBP13.41□□□□□ -0.26
HMGB2-205ENST00000511316 SV2AQ7L0J3 742 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 ERICH1Q86X53 443 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 ATP11CQ8NB49 1132 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 SPDL1Q96EA4 605 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 ZNF570Q96NI8 536 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 ZNF518BQ9C0D4 1074 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 MYLK2Q9H1R3 596 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 IKZF4Q9H2S9 585 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 FZD8Q9H461 694 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 KMT5AQ9NQR1 393 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 CHST12Q9NRB3 414 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 ZFATQ9P243 1243 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 ANKFY1Q9P2R3 1169 aa13.41□□□□□ -0.26
HMGB2-205ENST00000511316 MEIS3P2A8K0S8 358 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 RFXAPO00287 272 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 LIASO43766 372 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 SPAG6O75602 509 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 LDHAP00338 332 aaKnown RBP13.4□□□□□ -0.26
HMGB2-205ENST00000511316 GSTA2P09210 222 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 RRM1P23921 792 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 GATMP50440 423 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 SH3BGRP55822 239 aaPredicted RBP13.4□□□□□ -0.26
HMGB2-205ENST00000511316 GEMIN4P57678 1058 aaKnown RBP13.4□□□□□ -0.26
HMGB2-205ENST00000511316 MPP2Q14168 576 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 P3H1Q32P28 736 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 CGB2Q6NT52 195 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 TRIM42Q8IWZ5 723 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 ALLCQ8N6M5 410 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 PLEKHO2Q8TD55 490 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 MICAL1Q8TDZ2 1067 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 SEMA4DQ92854 862 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 KAT5Q92993 513 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 CCDC28BQ9BUN5 200 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 SAYSD1Q9NPB0 183 aa13.4□□□□□ -0.26
HMGB2-205ENST00000511316 LRRD1A4D1F6 860 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 A6NHS1 94 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 SLC16A4O15374 487 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 EXTL3O43909 919 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 TSPAN1O60635 241 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 ZNF623O75123 536 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 CA4P22748 312 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 BRD2P25440 801 aaKnown RBP13.39□□□□□ -0.27
HMGB2-205ENST00000511316 WDR4P57081 412 aaKnown RBP13.39□□□□□ -0.27
HMGB2-205ENST00000511316 ERVK-21P61565 698 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 PPARDQ03181 441 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 PSMD6Q15008 389 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 CCDC142Q17RM4 750 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 EFHC2Q5JST6 749 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 FAM91A1Q658Y4 838 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 SLFN12LQ6IEE8 588 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 C15orf39Q6ZRI6 1047 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 POLNQ7Z5Q5 900 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 NPAS4Q8IUM7 802 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 KIF2BQ8N4N8 673 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 TAS1R2Q8TE23 839 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 POMGNT1Q8WZA1 660 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 CLP1Q92989 425 aaKnown RBP13.39□□□□□ -0.27
HMGB2-205ENST00000511316 BTBD6Q96KE9 485 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 FNBP1Q96RU3 617 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 SH3GL3Q99963 347 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 ZBED2Q9BTP6 218 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 FRMD8Q9BZ67 464 aaPredicted RBP13.39□□□□□ -0.27
HMGB2-205ENST00000511316 INO80BQ9C086 356 aaPredicted RBP13.39□□□□□ -0.27
HMGB2-205ENST00000511316 ELAC1Q9H777 363 aaKnown RBP13.39□□□□□ -0.27
HMGB2-205ENST00000511316 CERS4Q9HA82 394 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 CNTN6Q9UQ52 1028 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 MTO1Q9Y2Z2 717 aaKnown RBP13.39□□□□□ -0.27
HMGB2-205ENST00000511316 DENND3A2RUS2 1198 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 B4GALT5O43286 388 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 DNAJC6O75061 913 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 SKIP12755 728 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 FOXN2P32314 431 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 AFF1P51825 1210 aaKnown RBP13.39□□□□□ -0.27
HMGB2-205ENST00000511316 ARL4CP56559 192 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 CDK18Q07002 472 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 PIGHQ14442 188 aaPredicted RBP13.39□□□□□ -0.27
HMGB2-205ENST00000511316 PPP2R2DQ66LE6 453 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 TAS1R3Q7RTX0 852 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 RBBP8NLQ8NC74 664 aaPredicted RBP13.39□□□□□ -0.27
HMGB2-205ENST00000511316 FEZF2Q8TBJ5 459 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 C10orf82Q8WW14 230 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 ATG4AQ8WYN0 398 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 CCDC127Q96BQ5 260 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 CASD1Q96PB1 797 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 NUDCD1Q96RS6 583 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 C17orf80Q9BSJ5 609 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 TRIM55Q9BYV6 548 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 PRDM12Q9H4Q4 367 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 TMEM161AQ9NX61 479 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 HCSTQ9UBK5 93 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 TBK1Q9UHD2 729 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 ZFP69BQ9UJL9 534 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 ZNF148Q9UQR1 794 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 CHKBQ9Y259 395 aa13.39□□□□□ -0.27
HMGB2-205ENST00000511316 A8MXQ7 604 aa13.38□□□□□ -0.27
HMGB2-205ENST00000511316 AHCYL1O43865 530 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms