RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 PPM1HQ9ULR3 514 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 NDRG2Q9UN36 371 aaKnown RBP9.18□□□□□ -0.94
PDPN-209ENST00000510906 MAGED2Q9UNF1 606 aaPredicted RBP9.18□□□□□ -0.94
PDPN-209ENST00000510906 PIAS3Q9Y6X2 628 aa9.18□□□□□ -0.94
PDPN-209ENST00000510906 CDC14CA4D256 554 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 SLC38A8A6NNN8 435 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 PROB1E7EW31 1015 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 PDXKO00764 312 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 SIN3BO75182 1162 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 TACC1O75410 805 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 TADA3O75528 432 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 NOL4O94818 638 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 RHOBTB3O94955 611 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 ZNF202O95125 648 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 VNN1O95497 513 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 CSH1P0DML2 217 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 CSH2P0DML3 217 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 SOX9P48436 509 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 RPL10AP62906 217 aaKnown RBP9.17□□□□□ -0.94
PDPN-209ENST00000510906 TNNC1P63316 161 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 DLG4P78352 724 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 FCHO2Q0JRZ9 810 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 FZD5Q13467 585 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 BIRC3Q13489 604 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 TRPC3Q13507 836 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 WDR72Q3MJ13 1102 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 CFAP221Q4G0U5 840 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 TDRD10Q5VZ19 366 aaKnown RBP9.17□□□□□ -0.94
PDPN-209ENST00000510906 SV2AQ7L0J3 742 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 ASCL5Q7RTU5 278 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 ERMP1Q7Z2K6 904 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 C1orf210Q8IVY1 113 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 YAF2Q8IY57 180 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 MAML2Q8IZL2 1156 aaPredicted RBP9.17□□□□□ -0.94
PDPN-209ENST00000510906 VWA5B2Q8N398 1253 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 TTC8Q8TAM2 541 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 E2F7Q96AV8 911 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 FUBP3Q96I24 572 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDPN-209ENST00000510906 ZFYVE19Q96K21 471 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 OSBPL6Q9BZF3 934 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 SNX25Q9H3E2 840 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 TRPV5Q9NQA5 729 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 NXF1Q9UBU9 619 aaKnown RBP9.17□□□□□ -0.94
PDPN-209ENST00000510906 MAPK8IP1Q9UQF2 711 aa9.17□□□□□ -0.94
PDPN-209ENST00000510906 TPRP12270 2363 aaKnown RBP9.17□□□□□ -0.94
PDPN-209ENST00000510906 FLNBO75369 2602 aaKnown RBP9.17□□□□□ -0.94
PDPN-209ENST00000510906 F5P12259 2224 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 TMEM238LA0A1B0GVL6 79 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 CHADO15335 359 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 CLSTN1O94985 981 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 C4BPAP04003 597 aaKnown RBP9.16□□□□□ -0.94
PDPN-209ENST00000510906 BDNFP23560 247 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 ATICP31939 592 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 GNL1P36915 607 aaPredicted RBP9.16□□□□□ -0.94
PDPN-209ENST00000510906 MAGEA11P43364 429 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 RAP1GAPP47736 663 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 CYP27A1Q02318 531 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 COL9A2Q14055 689 aaPredicted RBP9.16□□□□□ -0.94
PDPN-209ENST00000510906 ZNF699Q32M78 642 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 MDH1BQ5I0G3 518 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 C1orf220Q5T0J3 134 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 CEP135Q66GS9 1140 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 TXNDC8Q6A555 127 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 SCARA5Q6ZMJ2 495 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 C4orf50Q6ZRC1 276 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 SYT9Q86SS6 491 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 CMTM8Q8IZV2 173 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 FMR1NBQ8N0W7 255 aaPredicted RBP9.16□□□□□ -0.94
PDPN-209ENST00000510906 MAB21L3Q8N8X9 362 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 OR6B3Q8NGW1 331 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 RIN3Q8TB24 985 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 BPIFB1Q8TDL5 484 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 TMEM174Q8WUU8 243 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 FAM3CQ92520 227 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 MRPS31Q92665 395 aaKnown RBP9.16□□□□□ -0.94
PDPN-209ENST00000510906 USP13Q92995 863 aaPredicted RBP9.16□□□□□ -0.94
PDPN-209ENST00000510906 CCDC47Q96A33 483 aaKnown RBP9.16□□□□□ -0.94
PDPN-209ENST00000510906 SYAP1Q96A49 352 aaPredicted RBP9.16□□□□□ -0.94
PDPN-209ENST00000510906 CLDN23Q96B33 292 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 PCED1BQ96HM7 432 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 NELL2Q99435 816 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 MDFIQ99750 246 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 DPEP3Q9H4B8 488 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 SMYD3Q9H7B4 428 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 SPATA6Q9NWH7 488 aaPredicted RBP9.16□□□□□ -0.94
PDPN-209ENST00000510906 OBP2AQ9NY56 170 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 MAGEC2Q9UBF1 373 aaPredicted RBP9.16□□□□□ -0.94
PDPN-209ENST00000510906 TRAF3IP3Q9Y228 551 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 CCL26Q9Y258 94 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 MRPS17Q9Y2R5 130 aaKnown RBP9.16□□□□□ -0.94
PDPN-209ENST00000510906 R4GN57 208 aa9.16□□□□□ -0.94
PDPN-209ENST00000510906 PRR23AA6NEV1 266 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 A8MXQ7 604 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 MAN2B1O00754 1011 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 CALUO43852 315 aaPredicted RBP9.15□□□□□ -0.94
PDPN-209ENST00000510906 AKAP3O75969 853 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 KIF20AO95235 890 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 FAM163BP0C2L3 166 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 SP9P0CG40 484 aa9.15□□□□□ -0.94
PDPN-209ENST00000510906 PTPN1P18031 435 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms