RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	ACP1	P24666	158 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	CD27	P26842	260 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	INHBC	P55103	352 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	EVC	P57679	992 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	GABRE	P78334	506 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	PPP2R3A	Q06190	1150 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	AAMP	Q13685	434 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	NUMA1	Q14980	2115 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	ENOX2	Q16206	610 aa	Known RBP	11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	CDCP2	Q5VXM1	449 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	HIST2H2BC	Q6DN03	193 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	GRAMD4	Q6IC98	578 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	LAYN	Q6UX15	382 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	ZPBP2	Q6X784	338 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	CCDC81	Q6ZN84	652 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	KANSL1	Q7Z3B3	1105 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	TRIM22	Q8IYM9	498 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	BRF1	Q92994	677 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	VCPIP1	Q96JH7	1222 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	MMS19	Q96T76	1030 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	TTLL2	Q9BWV7	592 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	HAPLN2	Q9GZV7	340 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	POLR1B	Q9H9Y6	1135 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	SMPD4	Q9NXE4	827 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	TRPM5	Q9NZQ8	1165 aa		11.49	□□□□□ -0.57
PTCD2-208	ENST00000510676	SCN1A	P35498	2009 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	CCDC169	A6NNP5	214 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	WASH3P	C4AMC7	463 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	VILL	O15195	856 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	YKT6	O15498	198 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	CLDN3	O15551	220 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	CACNG3	O60359	315 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	TSPAN3	O60637	253 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	MAGEA11	P43364	429 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	PPP3CC	P48454	512 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	PEX3	P56589	373 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	E2F1	Q01094	437 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	PDIA5	Q14554	519 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	STARD3	Q14849	445 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	CALCRL	Q16602	461 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	SFMBT2	Q5VUG0	894 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	KDM7A	Q6ZMT4	941 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	PIK3AP1	Q6ZUJ8	805 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	TMEM25	Q86YD3	366 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	TMPRSS6	Q8IU80	811 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	DAW1	Q8N136	415 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	EID2	Q8N6I1	236 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	CCDC97	Q96F63	343 aa	Predicted RBP	11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	SIPA1	Q96FS4	1042 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	SPATA17	Q96L03	361 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	ACBD6	Q9BR61	282 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	NTPCR	Q9BSD7	190 aa	Known RBP	11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	NCOA5	Q9HCD5	579 aa	Known RBP	11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	SPHK2	Q9NRA0	654 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	LRWD1	Q9UFC0	647 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	KCNJ14	Q9UNX9	436 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	AKAP9	Q99996	3911 aa		11.48	□□□□□ -0.57
PTCD2-208	ENST00000510676	HIVEP1	P15822	2718 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	NPC1	O15118	1278 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	ITGAV	P06756	1048 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	RPA1	P27694	616 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	EPHA8	P29322	1005 aa	Predicted RBP	11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	COPA	P53621	1224 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	SSRP1	Q08945	709 aa	Known RBP	11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	ST3GAL1	Q11201	340 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	KRT32	Q14532	448 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	KYAT1	Q16773	422 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	EARS2	Q5JPH6	523 aa	Known RBP	11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676		Q6ZUG5	572 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	SCFD1	Q8WVM8	642 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	SNX19	Q92543	992 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	AIFM3	Q96NN9	605 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	PYM1	Q9BRP8	204 aa	Known RBP	11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	ESYT1	Q9BSJ8	1104 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	LRRC4C	Q9HCJ2	640 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	DNAJC17	Q9NVM6	304 aa	Known RBP	11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	STON1	Q9Y6Q2	735 aa		11.47	□□□□□ -0.57
PTCD2-208	ENST00000510676	EFS	O43281	561 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	LZTS3	O60299	673 aa	Predicted RBP	11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	ABCB4	P21439	1286 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	MUT	P22033	750 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	PDIA3	P30101	505 aa	Known RBP	11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	TXK	P42681	527 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	AFM	P43652	599 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	TAF6	P49848	677 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	USP46	P62068	366 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	RACK1	P63244	317 aa	Known RBP	11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	PROX2	Q3B8N5	592 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	INTS6L	Q5JSJ4	861 aa	Known RBP	11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	CD302	Q8IX05	232 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	KRI1	Q8N9T8	703 aa	Known RBP	11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	PRCC	Q92733	491 aa	Predicted RBP	11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	BIRC7	Q96CA5	298 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	ACE2	Q9BYF1	805 aa	Predicted RBP	11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	C17orf75	Q9HAS0	396 aa		11.46	□□□□□ -0.57
PTCD2-208	ENST00000510676	ANO2	Q9NQ90	1003 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms